Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6177 | 18754;18755;18756 | chr2:178729724;178729723;178729722 | chr2:179594451;179594450;179594449 |
N2AB | 5860 | 17803;17804;17805 | chr2:178729724;178729723;178729722 | chr2:179594451;179594450;179594449 |
N2A | 4933 | 15022;15023;15024 | chr2:178729724;178729723;178729722 | chr2:179594451;179594450;179594449 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs2080061909 | None | 0.954 | N | 0.602 | 0.19 | 0.668390147402 | gnomAD-4.0.0 | 1.59135E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85856E-06 | 0 | 0 |
V/L | None | None | 0.91 | N | 0.58 | 0.206 | 0.611224490431 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 3.66327E-05 |
V/M | rs1553921514 | None | 0.998 | N | 0.612 | 0.286 | 0.63694057803 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2215 | likely_benign | 0.1975 | benign | -1.714 | Destabilizing | 0.954 | D | 0.602 | neutral | N | 0.508545102 | None | None | N |
V/C | 0.7574 | likely_pathogenic | 0.7623 | pathogenic | -1.459 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
V/D | 0.4187 | ambiguous | 0.3786 | ambiguous | -2.012 | Highly Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
V/E | 0.3007 | likely_benign | 0.263 | benign | -1.841 | Destabilizing | 0.998 | D | 0.654 | neutral | N | 0.472776303 | None | None | N |
V/F | 0.1279 | likely_benign | 0.1197 | benign | -1.023 | Destabilizing | 0.942 | D | 0.601 | neutral | None | None | None | None | N |
V/G | 0.3055 | likely_benign | 0.2738 | benign | -2.196 | Highly Destabilizing | 0.998 | D | 0.686 | prob.neutral | N | 0.495074079 | None | None | N |
V/H | 0.4693 | ambiguous | 0.4307 | ambiguous | -1.928 | Destabilizing | 0.991 | D | 0.795 | deleterious | None | None | None | None | N |
V/I | 0.0729 | likely_benign | 0.0736 | benign | -0.399 | Destabilizing | 0.965 | D | 0.612 | neutral | None | None | None | None | N |
V/K | 0.3459 | ambiguous | 0.2998 | benign | -1.159 | Destabilizing | 0.996 | D | 0.652 | neutral | None | None | None | None | N |
V/L | 0.2 | likely_benign | 0.1807 | benign | -0.399 | Destabilizing | 0.91 | D | 0.58 | neutral | N | 0.509065177 | None | None | N |
V/M | 0.14 | likely_benign | 0.1314 | benign | -0.609 | Destabilizing | 0.998 | D | 0.612 | neutral | N | 0.477608906 | None | None | N |
V/N | 0.293 | likely_benign | 0.2703 | benign | -1.354 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
V/P | 0.9682 | likely_pathogenic | 0.9686 | pathogenic | -0.808 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/Q | 0.2979 | likely_benign | 0.2621 | benign | -1.269 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
V/R | 0.2577 | likely_benign | 0.2252 | benign | -1.049 | Destabilizing | 0.996 | D | 0.785 | deleterious | None | None | None | None | N |
V/S | 0.2023 | likely_benign | 0.1851 | benign | -2.004 | Highly Destabilizing | 0.996 | D | 0.653 | neutral | None | None | None | None | N |
V/T | 0.1522 | likely_benign | 0.1448 | benign | -1.695 | Destabilizing | 0.985 | D | 0.571 | neutral | None | None | None | None | N |
V/W | 0.7271 | likely_pathogenic | 0.7063 | pathogenic | -1.446 | Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
V/Y | 0.4252 | ambiguous | 0.4075 | ambiguous | -1.062 | Destabilizing | 0.155 | N | 0.43 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.