Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6179 | 18760;18761;18762 | chr2:178729718;178729717;178729716 | chr2:179594445;179594444;179594443 |
N2AB | 5862 | 17809;17810;17811 | chr2:178729718;178729717;178729716 | chr2:179594445;179594444;179594443 |
N2A | 4935 | 15028;15029;15030 | chr2:178729718;178729717;178729716 | chr2:179594445;179594444;179594443 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.999 | N | 0.635 | 0.323 | 0.397540356873 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/V | None | None | 1.0 | N | 0.852 | 0.465 | 0.539478914628 | gnomAD-4.0.0 | 1.5914E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85869E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3759 | ambiguous | 0.3659 | ambiguous | -1.127 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | N | 0.503076249 | None | None | N |
E/C | 0.9593 | likely_pathogenic | 0.9581 | pathogenic | -0.618 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
E/D | 0.4576 | ambiguous | 0.437 | ambiguous | -1.302 | Destabilizing | 0.999 | D | 0.586 | neutral | D | 0.540045228 | None | None | N |
E/F | 0.8705 | likely_pathogenic | 0.8627 | pathogenic | -0.796 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
E/G | 0.5699 | likely_pathogenic | 0.5394 | ambiguous | -1.504 | Destabilizing | 1.0 | D | 0.809 | deleterious | D | 0.540552207 | None | None | N |
E/H | 0.639 | likely_pathogenic | 0.6125 | pathogenic | -1.136 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
E/I | 0.4787 | ambiguous | 0.4748 | ambiguous | -0.087 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
E/K | 0.2012 | likely_benign | 0.1944 | benign | -0.9 | Destabilizing | 0.999 | D | 0.635 | neutral | N | 0.501291055 | None | None | N |
E/L | 0.603 | likely_pathogenic | 0.593 | pathogenic | -0.087 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
E/M | 0.6094 | likely_pathogenic | 0.6114 | pathogenic | 0.533 | Stabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
E/N | 0.6255 | likely_pathogenic | 0.6154 | pathogenic | -1.273 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
E/P | 0.9952 | likely_pathogenic | 0.9929 | pathogenic | -0.414 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
E/Q | 0.2026 | likely_benign | 0.1904 | benign | -1.131 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | D | 0.524533274 | None | None | N |
E/R | 0.3784 | ambiguous | 0.3571 | ambiguous | -0.739 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
E/S | 0.4945 | ambiguous | 0.476 | ambiguous | -1.704 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/T | 0.4169 | ambiguous | 0.4034 | ambiguous | -1.379 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
E/V | 0.3022 | likely_benign | 0.2955 | benign | -0.414 | Destabilizing | 1.0 | D | 0.852 | deleterious | N | 0.473875168 | None | None | N |
E/W | 0.9629 | likely_pathogenic | 0.9567 | pathogenic | -0.623 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
E/Y | 0.8208 | likely_pathogenic | 0.8021 | pathogenic | -0.551 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.