Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6192 | 18799;18800;18801 | chr2:178729679;178729678;178729677 | chr2:179594406;179594405;179594404 |
N2AB | 5875 | 17848;17849;17850 | chr2:178729679;178729678;178729677 | chr2:179594406;179594405;179594404 |
N2A | 4948 | 15067;15068;15069 | chr2:178729679;178729678;178729677 | chr2:179594406;179594405;179594404 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1457411847 | -0.082 | 0.939 | N | 0.569 | 0.297 | 0.342168650903 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
E/K | rs1457411847 | -0.082 | 0.939 | N | 0.569 | 0.297 | 0.342168650903 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/K | rs1457411847 | -0.082 | 0.939 | N | 0.569 | 0.297 | 0.342168650903 | gnomAD-4.0.0 | 1.31441E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.94048E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1373 | likely_benign | 0.1377 | benign | -0.607 | Destabilizing | 0.939 | D | 0.671 | neutral | N | 0.465778546 | None | None | N |
E/C | 0.8163 | likely_pathogenic | 0.8138 | pathogenic | -0.154 | Destabilizing | 0.999 | D | 0.722 | prob.delet. | None | None | None | None | N |
E/D | 0.1222 | likely_benign | 0.1188 | benign | -0.526 | Destabilizing | 0.02 | N | 0.179 | neutral | N | 0.457948497 | None | None | N |
E/F | 0.6007 | likely_pathogenic | 0.6012 | pathogenic | -0.308 | Destabilizing | 0.999 | D | 0.762 | deleterious | None | None | None | None | N |
E/G | 0.1957 | likely_benign | 0.1842 | benign | -0.852 | Destabilizing | 0.939 | D | 0.691 | prob.neutral | N | 0.486470159 | None | None | N |
E/H | 0.3451 | ambiguous | 0.3446 | ambiguous | -0.211 | Destabilizing | 0.999 | D | 0.654 | neutral | None | None | None | None | N |
E/I | 0.2453 | likely_benign | 0.2547 | benign | 0.024 | Stabilizing | 0.993 | D | 0.788 | deleterious | None | None | None | None | N |
E/K | 0.141 | likely_benign | 0.1312 | benign | 0.156 | Stabilizing | 0.939 | D | 0.569 | neutral | N | 0.449384942 | None | None | N |
E/L | 0.2791 | likely_benign | 0.2838 | benign | 0.024 | Stabilizing | 0.993 | D | 0.771 | deleterious | None | None | None | None | N |
E/M | 0.3374 | likely_benign | 0.3396 | benign | 0.235 | Stabilizing | 0.999 | D | 0.764 | deleterious | None | None | None | None | N |
E/N | 0.2152 | likely_benign | 0.2132 | benign | -0.297 | Destabilizing | 0.973 | D | 0.661 | neutral | None | None | None | None | N |
E/P | 0.6517 | likely_pathogenic | 0.5692 | pathogenic | -0.166 | Destabilizing | 0.993 | D | 0.78 | deleterious | None | None | None | None | N |
E/Q | 0.1109 | likely_benign | 0.1101 | benign | -0.237 | Destabilizing | 0.991 | D | 0.634 | neutral | N | 0.476744901 | None | None | N |
E/R | 0.2188 | likely_benign | 0.2096 | benign | 0.387 | Stabilizing | 0.993 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/S | 0.1804 | likely_benign | 0.1777 | benign | -0.468 | Destabilizing | 0.953 | D | 0.578 | neutral | None | None | None | None | N |
E/T | 0.166 | likely_benign | 0.1637 | benign | -0.261 | Destabilizing | 0.993 | D | 0.732 | prob.delet. | None | None | None | None | N |
E/V | 0.1597 | likely_benign | 0.1618 | benign | -0.166 | Destabilizing | 0.991 | D | 0.77 | deleterious | N | 0.463778391 | None | None | N |
E/W | 0.8221 | likely_pathogenic | 0.8206 | pathogenic | -0.073 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | N |
E/Y | 0.4858 | ambiguous | 0.4868 | ambiguous | -0.045 | Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.