Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6203 | 18832;18833;18834 | chr2:178729549;178729548;178729547 | chr2:179594276;179594275;179594274 |
N2AB | 5886 | 17881;17882;17883 | chr2:178729549;178729548;178729547 | chr2:179594276;179594275;179594274 |
N2A | 4959 | 15100;15101;15102 | chr2:178729549;178729548;178729547 | chr2:179594276;179594275;179594274 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.801 | N | 0.382 | 0.43 | 0.564503807532 | gnomAD-4.0.0 | 1.59392E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86331E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.32 | likely_benign | 0.383 | ambiguous | -0.585 | Destabilizing | 0.525 | D | 0.334 | neutral | None | None | None | None | I |
R/C | 0.1992 | likely_benign | 0.2397 | benign | -0.504 | Destabilizing | 0.998 | D | 0.298 | neutral | None | None | None | None | I |
R/D | 0.5573 | ambiguous | 0.6231 | pathogenic | 0.043 | Stabilizing | 0.842 | D | 0.423 | neutral | None | None | None | None | I |
R/E | 0.2545 | likely_benign | 0.2884 | benign | 0.187 | Stabilizing | 0.525 | D | 0.319 | neutral | None | None | None | None | I |
R/F | 0.5581 | ambiguous | 0.6286 | pathogenic | -0.272 | Destabilizing | 0.974 | D | 0.323 | neutral | None | None | None | None | I |
R/G | 0.1974 | likely_benign | 0.2419 | benign | -0.92 | Destabilizing | 0.801 | D | 0.382 | neutral | N | 0.500785298 | None | None | I |
R/H | 0.0995 | likely_benign | 0.1077 | benign | -1.269 | Destabilizing | 0.974 | D | 0.279 | neutral | None | None | None | None | I |
R/I | 0.2753 | likely_benign | 0.3306 | benign | 0.318 | Stabilizing | 0.934 | D | 0.374 | neutral | N | 0.501947203 | None | None | I |
R/K | 0.0849 | likely_benign | 0.092 | benign | -0.599 | Destabilizing | 0.022 | N | 0.119 | neutral | N | 0.411114555 | None | None | I |
R/L | 0.2456 | likely_benign | 0.2943 | benign | 0.318 | Stabilizing | 0.728 | D | 0.375 | neutral | None | None | None | None | I |
R/M | 0.2542 | likely_benign | 0.3041 | benign | -0.136 | Destabilizing | 0.991 | D | 0.301 | neutral | None | None | None | None | I |
R/N | 0.4417 | ambiguous | 0.492 | ambiguous | -0.152 | Destabilizing | 0.842 | D | 0.27 | neutral | None | None | None | None | I |
R/P | 0.861 | likely_pathogenic | 0.8964 | pathogenic | 0.039 | Stabilizing | 0.974 | D | 0.39 | neutral | None | None | None | None | I |
R/Q | 0.0898 | likely_benign | 0.0961 | benign | -0.222 | Destabilizing | 0.172 | N | 0.161 | neutral | None | None | None | None | I |
R/S | 0.3445 | ambiguous | 0.3949 | ambiguous | -0.834 | Destabilizing | 0.454 | N | 0.336 | neutral | N | 0.482553366 | None | None | I |
R/T | 0.1464 | likely_benign | 0.1769 | benign | -0.499 | Destabilizing | 0.051 | N | 0.187 | neutral | N | 0.464543608 | None | None | I |
R/V | 0.3312 | likely_benign | 0.3896 | ambiguous | 0.039 | Stabilizing | 0.728 | D | 0.423 | neutral | None | None | None | None | I |
R/W | 0.1744 | likely_benign | 0.1903 | benign | 0.035 | Stabilizing | 0.998 | D | 0.296 | neutral | None | None | None | None | I |
R/Y | 0.3944 | ambiguous | 0.4499 | ambiguous | 0.314 | Stabilizing | 0.991 | D | 0.348 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.