Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6228 | 18907;18908;18909 | chr2:178729474;178729473;178729472 | chr2:179594201;179594200;179594199 |
N2AB | 5911 | 17956;17957;17958 | chr2:178729474;178729473;178729472 | chr2:179594201;179594200;179594199 |
N2A | 4984 | 15175;15176;15177 | chr2:178729474;178729473;178729472 | chr2:179594201;179594200;179594199 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | rs1192303175 | -2.888 | 0.991 | N | 0.705 | 0.495 | 0.784914850903 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
F/S | rs1192303175 | -2.888 | 0.991 | N | 0.705 | 0.495 | 0.784914850903 | gnomAD-4.0.0 | 1.59172E-06 | None | None | None | None | N | None | 0 | 2.28739E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.7106 | likely_pathogenic | 0.7836 | pathogenic | -2.708 | Highly Destabilizing | 0.953 | D | 0.634 | neutral | None | None | None | None | N |
F/C | 0.4936 | ambiguous | 0.6279 | pathogenic | -1.634 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | N | 0.513609634 | None | None | N |
F/D | 0.9617 | likely_pathogenic | 0.9695 | pathogenic | -2.568 | Highly Destabilizing | 0.998 | D | 0.775 | deleterious | None | None | None | None | N |
F/E | 0.9632 | likely_pathogenic | 0.9716 | pathogenic | -2.375 | Highly Destabilizing | 0.993 | D | 0.765 | deleterious | None | None | None | None | N |
F/G | 0.899 | likely_pathogenic | 0.9323 | pathogenic | -3.139 | Highly Destabilizing | 0.993 | D | 0.743 | deleterious | None | None | None | None | N |
F/H | 0.8113 | likely_pathogenic | 0.8688 | pathogenic | -1.598 | Destabilizing | 0.986 | D | 0.704 | prob.neutral | None | None | None | None | N |
F/I | 0.3761 | ambiguous | 0.3751 | ambiguous | -1.318 | Destabilizing | 0.982 | D | 0.664 | neutral | N | 0.501272413 | None | None | N |
F/K | 0.9571 | likely_pathogenic | 0.9684 | pathogenic | -1.719 | Destabilizing | 0.993 | D | 0.769 | deleterious | None | None | None | None | N |
F/L | 0.8102 | likely_pathogenic | 0.8411 | pathogenic | -1.318 | Destabilizing | 0.885 | D | 0.494 | neutral | N | 0.499192113 | None | None | N |
F/M | 0.5724 | likely_pathogenic | 0.6325 | pathogenic | -1.099 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
F/N | 0.8755 | likely_pathogenic | 0.9135 | pathogenic | -2.064 | Highly Destabilizing | 0.998 | D | 0.769 | deleterious | None | None | None | None | N |
F/P | 0.958 | likely_pathogenic | 0.9647 | pathogenic | -1.789 | Destabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | N |
F/Q | 0.9226 | likely_pathogenic | 0.9485 | pathogenic | -2.04 | Highly Destabilizing | 0.998 | D | 0.761 | deleterious | None | None | None | None | N |
F/R | 0.9058 | likely_pathogenic | 0.9294 | pathogenic | -1.252 | Destabilizing | 0.993 | D | 0.771 | deleterious | None | None | None | None | N |
F/S | 0.652 | likely_pathogenic | 0.742 | pathogenic | -2.792 | Highly Destabilizing | 0.991 | D | 0.705 | prob.neutral | N | 0.48609763 | None | None | N |
F/T | 0.7484 | likely_pathogenic | 0.8136 | pathogenic | -2.491 | Highly Destabilizing | 0.993 | D | 0.715 | prob.delet. | None | None | None | None | N |
F/V | 0.3339 | likely_benign | 0.3637 | ambiguous | -1.789 | Destabilizing | 0.939 | D | 0.65 | neutral | N | 0.499117542 | None | None | N |
F/W | 0.5625 | ambiguous | 0.6214 | pathogenic | -0.246 | Destabilizing | 0.998 | D | 0.648 | neutral | None | None | None | None | N |
F/Y | 0.2221 | likely_benign | 0.2733 | benign | -0.611 | Destabilizing | 0.046 | N | 0.301 | neutral | N | 0.49047895 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.