Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6229 | 18910;18911;18912 | chr2:178729471;178729470;178729469 | chr2:179594198;179594197;179594196 |
N2AB | 5912 | 17959;17960;17961 | chr2:178729471;178729470;178729469 | chr2:179594198;179594197;179594196 |
N2A | 4985 | 15178;15179;15180 | chr2:178729471;178729470;178729469 | chr2:179594198;179594197;179594196 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs376583582 | None | 0.22 | N | 0.581 | 0.115 | 0.258779203287 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs376583582 | None | 0.22 | N | 0.581 | 0.115 | 0.258779203287 | gnomAD-4.0.0 | 3.84422E-06 | None | None | None | None | I | None | 5.07546E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | None | None | 0.22 | N | 0.602 | 0.468 | 0.501810158561 | gnomAD-4.0.0 | 1.36858E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.31367E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1377 | likely_benign | 0.1511 | benign | -0.282 | Destabilizing | 0.124 | N | 0.603 | neutral | D | 0.534753055 | None | None | I |
E/C | 0.7882 | likely_pathogenic | 0.8054 | pathogenic | -0.01 | Destabilizing | 0.968 | D | 0.738 | prob.delet. | None | None | None | None | I |
E/D | 0.1297 | likely_benign | 0.14 | benign | -0.34 | Destabilizing | 0.22 | N | 0.581 | neutral | N | 0.519687602 | None | None | I |
E/F | 0.6215 | likely_pathogenic | 0.6465 | pathogenic | -0.157 | Destabilizing | 0.89 | D | 0.717 | prob.delet. | None | None | None | None | I |
E/G | 0.1819 | likely_benign | 0.1962 | benign | -0.467 | Destabilizing | 0.22 | N | 0.602 | neutral | N | 0.508182039 | None | None | I |
E/H | 0.2747 | likely_benign | 0.2943 | benign | 0.126 | Stabilizing | 0.567 | D | 0.651 | neutral | None | None | None | None | I |
E/I | 0.2686 | likely_benign | 0.2857 | benign | 0.165 | Stabilizing | 0.726 | D | 0.723 | prob.delet. | None | None | None | None | I |
E/K | 0.1094 | likely_benign | 0.1081 | benign | 0.492 | Stabilizing | 0.001 | N | 0.205 | neutral | N | 0.49977369 | None | None | I |
E/L | 0.2867 | likely_benign | 0.3185 | benign | 0.165 | Stabilizing | 0.567 | D | 0.604 | neutral | None | None | None | None | I |
E/M | 0.35 | ambiguous | 0.371 | ambiguous | 0.193 | Stabilizing | 0.909 | D | 0.717 | prob.delet. | None | None | None | None | I |
E/N | 0.2092 | likely_benign | 0.2186 | benign | 0.082 | Stabilizing | 0.567 | D | 0.609 | neutral | None | None | None | None | I |
E/P | 0.807 | likely_pathogenic | 0.8549 | pathogenic | 0.036 | Stabilizing | 0.726 | D | 0.681 | prob.neutral | None | None | None | None | I |
E/Q | 0.0993 | likely_benign | 0.1072 | benign | 0.125 | Stabilizing | 0.002 | N | 0.249 | neutral | N | 0.510990761 | None | None | I |
E/R | 0.1667 | likely_benign | 0.1661 | benign | 0.659 | Stabilizing | 0.157 | N | 0.605 | neutral | None | None | None | None | I |
E/S | 0.1617 | likely_benign | 0.1723 | benign | -0.032 | Destabilizing | 0.157 | N | 0.575 | neutral | None | None | None | None | I |
E/T | 0.1548 | likely_benign | 0.1666 | benign | 0.128 | Stabilizing | 0.567 | D | 0.631 | neutral | None | None | None | None | I |
E/V | 0.1618 | likely_benign | 0.1766 | benign | 0.036 | Stabilizing | 0.497 | N | 0.617 | neutral | D | 0.529712595 | None | None | I |
E/W | 0.7848 | likely_pathogenic | 0.8069 | pathogenic | -0.012 | Destabilizing | 0.968 | D | 0.733 | prob.delet. | None | None | None | None | I |
E/Y | 0.4848 | ambiguous | 0.5088 | ambiguous | 0.093 | Stabilizing | 0.726 | D | 0.734 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.