Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6236 | 18931;18932;18933 | chr2:178729450;178729449;178729448 | chr2:179594177;179594176;179594175 |
N2AB | 5919 | 17980;17981;17982 | chr2:178729450;178729449;178729448 | chr2:179594177;179594176;179594175 |
N2A | 4992 | 15199;15200;15201 | chr2:178729450;178729449;178729448 | chr2:179594177;179594176;179594175 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs758455641 | 0.43 | 0.642 | N | 0.333 | 0.161 | 0.0954503805726 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.64E-05 | 3.56E-05 | 0 |
N/D | rs758455641 | 0.43 | 0.642 | N | 0.333 | 0.161 | 0.0954503805726 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/D | rs758455641 | 0.43 | 0.642 | N | 0.333 | 0.161 | 0.0954503805726 | gnomAD-4.0.0 | 1.02511E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.56868E-05 | 0 | 1.43631E-05 | 0 | 2.84463E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2498 | likely_benign | 0.2823 | benign | -0.141 | Destabilizing | 0.013 | N | 0.167 | neutral | None | None | None | None | N |
N/C | 0.3994 | ambiguous | 0.4088 | ambiguous | 0.297 | Stabilizing | 0.995 | D | 0.381 | neutral | None | None | None | None | N |
N/D | 0.1268 | likely_benign | 0.1338 | benign | 0.212 | Stabilizing | 0.642 | D | 0.333 | neutral | N | 0.447722277 | None | None | N |
N/E | 0.3387 | likely_benign | 0.3689 | ambiguous | 0.174 | Stabilizing | 0.329 | N | 0.298 | neutral | None | None | None | None | N |
N/F | 0.5721 | likely_pathogenic | 0.6087 | pathogenic | -0.56 | Destabilizing | 0.981 | D | 0.405 | neutral | None | None | None | None | N |
N/G | 0.183 | likely_benign | 0.1919 | benign | -0.296 | Destabilizing | 0.003 | N | 0.134 | neutral | None | None | None | None | N |
N/H | 0.1012 | likely_benign | 0.107 | benign | -0.299 | Destabilizing | 0.975 | D | 0.339 | neutral | N | 0.51389134 | None | None | N |
N/I | 0.3833 | ambiguous | 0.4328 | ambiguous | 0.172 | Stabilizing | 0.927 | D | 0.454 | neutral | N | 0.483964587 | None | None | N |
N/K | 0.2414 | likely_benign | 0.2428 | benign | 0.121 | Stabilizing | 0.006 | N | 0.173 | neutral | N | 0.430888742 | None | None | N |
N/L | 0.3107 | likely_benign | 0.3432 | ambiguous | 0.172 | Stabilizing | 0.704 | D | 0.431 | neutral | None | None | None | None | N |
N/M | 0.408 | ambiguous | 0.4368 | ambiguous | 0.286 | Stabilizing | 0.981 | D | 0.374 | neutral | None | None | None | None | N |
N/P | 0.7379 | likely_pathogenic | 0.8011 | pathogenic | 0.094 | Stabilizing | 0.944 | D | 0.447 | neutral | None | None | None | None | N |
N/Q | 0.2425 | likely_benign | 0.2635 | benign | -0.235 | Destabilizing | 0.704 | D | 0.362 | neutral | None | None | None | None | N |
N/R | 0.2633 | likely_benign | 0.2691 | benign | 0.159 | Stabilizing | 0.543 | D | 0.322 | neutral | None | None | None | None | N |
N/S | 0.082 | likely_benign | 0.0848 | benign | -0.042 | Destabilizing | 0.065 | N | 0.146 | neutral | N | 0.448223709 | None | None | N |
N/T | 0.1797 | likely_benign | 0.2036 | benign | 0.053 | Stabilizing | 0.27 | N | 0.301 | neutral | N | 0.513197907 | None | None | N |
N/V | 0.3871 | ambiguous | 0.4383 | ambiguous | 0.094 | Stabilizing | 0.704 | D | 0.439 | neutral | None | None | None | None | N |
N/W | 0.753 | likely_pathogenic | 0.776 | pathogenic | -0.615 | Destabilizing | 0.995 | D | 0.414 | neutral | None | None | None | None | N |
N/Y | 0.2026 | likely_benign | 0.2107 | benign | -0.319 | Destabilizing | 0.975 | D | 0.393 | neutral | N | 0.460998486 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.