Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6255 | 18988;18989;18990 | chr2:178729393;178729392;178729391 | chr2:179594120;179594119;179594118 |
N2AB | 5938 | 18037;18038;18039 | chr2:178729393;178729392;178729391 | chr2:179594120;179594119;179594118 |
N2A | 5011 | 15256;15257;15258 | chr2:178729393;178729392;178729391 | chr2:179594120;179594119;179594118 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs2079983036 | None | 0.007 | N | 0.399 | 0.079 | 0.139678290688 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07039E-04 | 0 |
N/D | rs2079983036 | None | 0.007 | N | 0.399 | 0.079 | 0.139678290688 | gnomAD-4.0.0 | 2.5627E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.67996E-05 | 0 |
N/K | None | None | None | N | 0.261 | 0.099 | 0.0716867268079 | gnomAD-4.0.0 | 6.8428E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99552E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1281 | likely_benign | 0.1401 | benign | -1.076 | Destabilizing | None | N | 0.371 | neutral | None | None | None | None | N |
N/C | 0.1364 | likely_benign | 0.1559 | benign | -0.439 | Destabilizing | 0.245 | N | 0.617 | neutral | None | None | None | None | N |
N/D | 0.1202 | likely_benign | 0.1215 | benign | -1.749 | Destabilizing | 0.007 | N | 0.399 | neutral | N | 0.470893578 | None | None | N |
N/E | 0.2672 | likely_benign | 0.2714 | benign | -1.475 | Destabilizing | None | N | 0.26 | neutral | None | None | None | None | N |
N/F | 0.241 | likely_benign | 0.2659 | benign | -0.438 | Destabilizing | 0.022 | N | 0.633 | neutral | None | None | None | None | N |
N/G | 0.1713 | likely_benign | 0.1858 | benign | -1.513 | Destabilizing | None | N | 0.186 | neutral | None | None | None | None | N |
N/H | 0.0616 | likely_benign | 0.061 | benign | -1.056 | Destabilizing | None | N | 0.384 | neutral | N | 0.4654104 | None | None | N |
N/I | 0.1176 | likely_benign | 0.1196 | benign | 0.108 | Stabilizing | 0.033 | N | 0.627 | neutral | N | 0.455617481 | None | None | N |
N/K | 0.1561 | likely_benign | 0.1573 | benign | -0.295 | Destabilizing | None | N | 0.261 | neutral | N | 0.445168414 | None | None | N |
N/L | 0.1197 | likely_benign | 0.1266 | benign | 0.108 | Stabilizing | 0.009 | N | 0.547 | neutral | None | None | None | None | N |
N/M | 0.2124 | likely_benign | 0.2206 | benign | 0.239 | Stabilizing | 0.245 | N | 0.573 | neutral | None | None | None | None | N |
N/P | 0.7192 | likely_pathogenic | 0.7 | pathogenic | -0.259 | Destabilizing | 0.044 | N | 0.598 | neutral | None | None | None | None | N |
N/Q | 0.1813 | likely_benign | 0.1868 | benign | -0.795 | Destabilizing | 0.022 | N | 0.476 | neutral | None | None | None | None | N |
N/R | 0.1485 | likely_benign | 0.1438 | benign | -0.686 | Destabilizing | 0.009 | N | 0.433 | neutral | None | None | None | None | N |
N/S | 0.0622 | likely_benign | 0.0637 | benign | -1.348 | Destabilizing | None | N | 0.201 | neutral | N | 0.369169145 | None | None | N |
N/T | 0.0789 | likely_benign | 0.0843 | benign | -0.878 | Destabilizing | None | N | 0.188 | neutral | N | 0.388906912 | None | None | N |
N/V | 0.137 | likely_benign | 0.1407 | benign | -0.259 | Destabilizing | 0.009 | N | 0.561 | neutral | None | None | None | None | N |
N/W | 0.4613 | ambiguous | 0.4655 | ambiguous | -0.41 | Destabilizing | 0.55 | D | 0.617 | neutral | None | None | None | None | N |
N/Y | 0.0828 | likely_benign | 0.0904 | benign | -0.047 | Destabilizing | None | N | 0.439 | neutral | N | 0.448614151 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.