Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6257 | 18994;18995;18996 | chr2:178729387;178729386;178729385 | chr2:179594114;179594113;179594112 |
N2AB | 5940 | 18043;18044;18045 | chr2:178729387;178729386;178729385 | chr2:179594114;179594113;179594112 |
N2A | 5013 | 15262;15263;15264 | chr2:178729387;178729386;178729385 | chr2:179594114;179594113;179594112 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs371299041 | -1.134 | 0.007 | N | 0.404 | 0.112 | None | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 1.57E-05 | 0 |
H/R | rs371299041 | -1.134 | 0.007 | N | 0.404 | 0.112 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
H/R | rs371299041 | -1.134 | 0.007 | N | 0.404 | 0.112 | None | gnomAD-4.0.0 | 1.17755E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.64582E-04 | 1.27155E-05 | 3.29337E-05 | 0 |
H/Y | None | None | 0.175 | N | 0.478 | 0.108 | 0.286465849087 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1814 | likely_benign | 0.1743 | benign | -0.954 | Destabilizing | 0.004 | N | 0.372 | neutral | None | None | None | None | N |
H/C | 0.117 | likely_benign | 0.1165 | benign | -0.379 | Destabilizing | 0.788 | D | 0.517 | neutral | None | None | None | None | N |
H/D | 0.1966 | likely_benign | 0.1989 | benign | -0.59 | Destabilizing | None | N | 0.257 | neutral | N | 0.506006229 | None | None | N |
H/E | 0.2049 | likely_benign | 0.2054 | benign | -0.514 | Destabilizing | None | N | 0.202 | neutral | None | None | None | None | N |
H/F | 0.2052 | likely_benign | 0.2084 | benign | -0.144 | Destabilizing | 0.245 | N | 0.52 | neutral | None | None | None | None | N |
H/G | 0.2457 | likely_benign | 0.2274 | benign | -1.283 | Destabilizing | 0.004 | N | 0.369 | neutral | None | None | None | None | N |
H/I | 0.1651 | likely_benign | 0.1733 | benign | -0.057 | Destabilizing | 0.085 | N | 0.555 | neutral | None | None | None | None | N |
H/K | 0.1477 | likely_benign | 0.1542 | benign | -0.893 | Destabilizing | None | N | 0.251 | neutral | None | None | None | None | N |
H/L | 0.0939 | likely_benign | 0.0919 | benign | -0.057 | Destabilizing | 0.014 | N | 0.444 | neutral | N | 0.458001638 | None | None | N |
H/M | 0.3104 | likely_benign | 0.3077 | benign | -0.163 | Destabilizing | 0.245 | N | 0.489 | neutral | None | None | None | None | N |
H/N | 0.0898 | likely_benign | 0.0965 | benign | -0.823 | Destabilizing | None | N | 0.207 | neutral | N | 0.474491243 | None | None | N |
H/P | 0.6529 | likely_pathogenic | 0.5896 | pathogenic | -0.335 | Destabilizing | 0.065 | N | 0.518 | neutral | N | 0.50174635 | None | None | N |
H/Q | 0.1104 | likely_benign | 0.107 | benign | -0.644 | Destabilizing | None | N | 0.241 | neutral | N | 0.433375339 | None | None | N |
H/R | 0.0714 | likely_benign | 0.0674 | benign | -1.131 | Destabilizing | 0.007 | N | 0.404 | neutral | N | 0.453305108 | None | None | N |
H/S | 0.1582 | likely_benign | 0.1497 | benign | -0.969 | Destabilizing | None | N | 0.251 | neutral | None | None | None | None | N |
H/T | 0.1575 | likely_benign | 0.1601 | benign | -0.796 | Destabilizing | 0.009 | N | 0.399 | neutral | None | None | None | None | N |
H/V | 0.1555 | likely_benign | 0.1591 | benign | -0.335 | Destabilizing | 0.044 | N | 0.502 | neutral | None | None | None | None | N |
H/W | 0.2881 | likely_benign | 0.2542 | benign | 0.071 | Stabilizing | 0.788 | D | 0.524 | neutral | None | None | None | None | N |
H/Y | 0.0791 | likely_benign | 0.0826 | benign | 0.312 | Stabilizing | 0.175 | N | 0.478 | neutral | N | 0.508873176 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.