Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6258 | 18997;18998;18999 | chr2:178729384;178729383;178729382 | chr2:179594111;179594110;179594109 |
N2AB | 5941 | 18046;18047;18048 | chr2:178729384;178729383;178729382 | chr2:179594111;179594110;179594109 |
N2A | 5014 | 15265;15266;15267 | chr2:178729384;178729383;178729382 | chr2:179594111;179594110;179594109 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/K | rs746617599 | -2.194 | 0.939 | D | 0.82 | 0.832 | 0.926597058261 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8952 | likely_pathogenic | 0.8943 | pathogenic | -2.909 | Highly Destabilizing | 0.373 | N | 0.587 | neutral | None | None | None | None | N |
I/C | 0.9073 | likely_pathogenic | 0.9163 | pathogenic | -2.525 | Highly Destabilizing | 0.996 | D | 0.798 | deleterious | None | None | None | None | N |
I/D | 0.9947 | likely_pathogenic | 0.9951 | pathogenic | -3.668 | Highly Destabilizing | 0.953 | D | 0.829 | deleterious | None | None | None | None | N |
I/E | 0.9871 | likely_pathogenic | 0.9881 | pathogenic | -3.381 | Highly Destabilizing | 0.953 | D | 0.822 | deleterious | None | None | None | None | N |
I/F | 0.3509 | ambiguous | 0.4012 | ambiguous | -1.55 | Destabilizing | 0.91 | D | 0.687 | prob.neutral | None | None | None | None | N |
I/G | 0.9795 | likely_pathogenic | 0.98 | pathogenic | -3.474 | Highly Destabilizing | 0.854 | D | 0.813 | deleterious | None | None | None | None | N |
I/H | 0.9628 | likely_pathogenic | 0.9681 | pathogenic | -3.086 | Highly Destabilizing | 0.996 | D | 0.862 | deleterious | None | None | None | None | N |
I/K | 0.968 | likely_pathogenic | 0.973 | pathogenic | -2.275 | Highly Destabilizing | 0.939 | D | 0.82 | deleterious | D | 0.634557338 | None | None | N |
I/L | 0.2196 | likely_benign | 0.1912 | benign | -1.209 | Destabilizing | 0.164 | N | 0.395 | neutral | D | 0.535101581 | None | None | N |
I/M | 0.2246 | likely_benign | 0.2219 | benign | -1.557 | Destabilizing | 0.939 | D | 0.662 | neutral | D | 0.561405831 | None | None | N |
I/N | 0.9294 | likely_pathogenic | 0.9368 | pathogenic | -2.913 | Highly Destabilizing | 0.953 | D | 0.859 | deleterious | None | None | None | None | N |
I/P | 0.9922 | likely_pathogenic | 0.9911 | pathogenic | -1.768 | Destabilizing | 0.984 | D | 0.852 | deleterious | None | None | None | None | N |
I/Q | 0.9668 | likely_pathogenic | 0.9707 | pathogenic | -2.601 | Highly Destabilizing | 0.984 | D | 0.864 | deleterious | None | None | None | None | N |
I/R | 0.9499 | likely_pathogenic | 0.9583 | pathogenic | -2.186 | Highly Destabilizing | 0.939 | D | 0.864 | deleterious | D | 0.634557338 | None | None | N |
I/S | 0.9212 | likely_pathogenic | 0.9254 | pathogenic | -3.47 | Highly Destabilizing | 0.59 | D | 0.764 | deleterious | None | None | None | None | N |
I/T | 0.9053 | likely_pathogenic | 0.9167 | pathogenic | -3.038 | Highly Destabilizing | 0.028 | N | 0.493 | neutral | D | 0.601882843 | None | None | N |
I/V | 0.0962 | likely_benign | 0.0984 | benign | -1.768 | Destabilizing | 0.001 | N | 0.281 | neutral | D | 0.537844732 | None | None | N |
I/W | 0.9691 | likely_pathogenic | 0.9735 | pathogenic | -2.042 | Highly Destabilizing | 0.996 | D | 0.851 | deleterious | None | None | None | None | N |
I/Y | 0.8791 | likely_pathogenic | 0.8964 | pathogenic | -1.908 | Destabilizing | 0.953 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.