Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6266 | 19021;19022;19023 | chr2:178729360;178729359;178729358 | chr2:179594087;179594086;179594085 |
N2AB | 5949 | 18070;18071;18072 | chr2:178729360;178729359;178729358 | chr2:179594087;179594086;179594085 |
N2A | 5022 | 15289;15290;15291 | chr2:178729360;178729359;178729358 | chr2:179594087;179594086;179594085 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs761009610 | -0.714 | None | N | 0.105 | 0.057 | 0.0716867268079 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
T/A | rs761009610 | -0.714 | None | N | 0.105 | 0.057 | 0.0716867268079 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 1.30976E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/A | rs761009610 | -0.714 | None | N | 0.105 | 0.057 | 0.0716867268079 | gnomAD-4.0.0 | 7.68805E-06 | None | None | None | None | N | None | 0 | 5.08595E-05 | None | 0 | 0 | None | 0 | 0 | 7.18085E-06 | 0 | 0 |
T/I | None | None | 0.004 | N | 0.428 | 0.067 | 0.290590437066 | gnomAD-4.0.0 | 1.59174E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85922E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0637 | likely_benign | 0.0648 | benign | -0.915 | Destabilizing | None | N | 0.105 | neutral | N | 0.387448262 | None | None | N |
T/C | 0.3354 | likely_benign | 0.3287 | benign | -0.45 | Destabilizing | 0.356 | N | 0.555 | neutral | None | None | None | None | N |
T/D | 0.347 | ambiguous | 0.3318 | benign | -0.181 | Destabilizing | 0.072 | N | 0.511 | neutral | None | None | None | None | N |
T/E | 0.2566 | likely_benign | 0.2551 | benign | -0.195 | Destabilizing | 0.072 | N | 0.529 | neutral | None | None | None | None | N |
T/F | 0.2099 | likely_benign | 0.2016 | benign | -1.124 | Destabilizing | 0.214 | N | 0.605 | neutral | None | None | None | None | N |
T/G | 0.1913 | likely_benign | 0.1819 | benign | -1.15 | Destabilizing | 0.016 | N | 0.396 | neutral | None | None | None | None | N |
T/H | 0.2745 | likely_benign | 0.2598 | benign | -1.464 | Destabilizing | 0.628 | D | 0.532 | neutral | None | None | None | None | N |
T/I | 0.1029 | likely_benign | 0.1016 | benign | -0.382 | Destabilizing | 0.004 | N | 0.428 | neutral | N | 0.466815909 | None | None | N |
T/K | 0.2196 | likely_benign | 0.2073 | benign | -0.67 | Destabilizing | 0.072 | N | 0.528 | neutral | None | None | None | None | N |
T/L | 0.0876 | likely_benign | 0.0872 | benign | -0.382 | Destabilizing | 0.007 | N | 0.337 | neutral | None | None | None | None | N |
T/M | 0.0847 | likely_benign | 0.0816 | benign | 0.074 | Stabilizing | 0.214 | N | 0.565 | neutral | None | None | None | None | N |
T/N | 0.1255 | likely_benign | 0.1188 | benign | -0.565 | Destabilizing | 0.055 | N | 0.483 | neutral | N | 0.489287337 | None | None | N |
T/P | 0.2491 | likely_benign | 0.2044 | benign | -0.529 | Destabilizing | 0.106 | N | 0.572 | neutral | D | 0.535771775 | None | None | N |
T/Q | 0.2298 | likely_benign | 0.2206 | benign | -0.778 | Destabilizing | 0.356 | N | 0.613 | neutral | None | None | None | None | N |
T/R | 0.1599 | likely_benign | 0.1544 | benign | -0.417 | Destabilizing | 0.136 | N | 0.606 | neutral | None | None | None | None | N |
T/S | 0.0933 | likely_benign | 0.0921 | benign | -0.875 | Destabilizing | 0.001 | N | 0.129 | neutral | N | 0.417731096 | None | None | N |
T/V | 0.0945 | likely_benign | 0.0944 | benign | -0.529 | Destabilizing | None | N | 0.119 | neutral | None | None | None | None | N |
T/W | 0.596 | likely_pathogenic | 0.5442 | ambiguous | -1.028 | Destabilizing | 0.864 | D | 0.547 | neutral | None | None | None | None | N |
T/Y | 0.2583 | likely_benign | 0.2495 | benign | -0.798 | Destabilizing | 0.356 | N | 0.568 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.