Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6304 | 19135;19136;19137 | chr2:178729128;178729127;178729126 | chr2:179593855;179593854;179593853 |
N2AB | 5987 | 18184;18185;18186 | chr2:178729128;178729127;178729126 | chr2:179593855;179593854;179593853 |
N2A | 5060 | 15403;15404;15405 | chr2:178729128;178729127;178729126 | chr2:179593855;179593854;179593853 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.117 | N | 0.309 | 0.08 | 0.427368086475 | gnomAD-4.0.0 | 6.88716E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02961E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2078 | likely_benign | 0.1842 | benign | -0.683 | Destabilizing | 0.977 | D | 0.548 | neutral | N | 0.509006462 | None | None | I |
V/C | 0.8232 | likely_pathogenic | 0.8025 | pathogenic | -0.73 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | I |
V/D | 0.4389 | ambiguous | 0.3607 | ambiguous | -0.101 | Destabilizing | 0.999 | D | 0.754 | deleterious | D | 0.527477579 | None | None | I |
V/E | 0.2848 | likely_benign | 0.2516 | benign | -0.181 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | I |
V/F | 0.1395 | likely_benign | 0.1293 | benign | -0.672 | Destabilizing | 0.993 | D | 0.668 | neutral | N | 0.497809557 | None | None | I |
V/G | 0.3038 | likely_benign | 0.2569 | benign | -0.87 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | N | 0.486426798 | None | None | I |
V/H | 0.5893 | likely_pathogenic | 0.5514 | ambiguous | -0.322 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
V/I | 0.0734 | likely_benign | 0.0737 | benign | -0.326 | Destabilizing | 0.117 | N | 0.309 | neutral | N | 0.490652774 | None | None | I |
V/K | 0.3474 | ambiguous | 0.3184 | benign | -0.522 | Destabilizing | 0.998 | D | 0.719 | prob.delet. | None | None | None | None | I |
V/L | 0.1407 | likely_benign | 0.1407 | benign | -0.326 | Destabilizing | 0.898 | D | 0.559 | neutral | N | 0.455558766 | None | None | I |
V/M | 0.1168 | likely_benign | 0.1142 | benign | -0.37 | Destabilizing | 0.995 | D | 0.672 | neutral | None | None | None | None | I |
V/N | 0.3087 | likely_benign | 0.2646 | benign | -0.311 | Destabilizing | 0.999 | D | 0.754 | deleterious | None | None | None | None | I |
V/P | 0.5377 | ambiguous | 0.5136 | ambiguous | -0.408 | Destabilizing | 0.999 | D | 0.74 | deleterious | None | None | None | None | I |
V/Q | 0.3199 | likely_benign | 0.2979 | benign | -0.515 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | I |
V/R | 0.3183 | likely_benign | 0.3095 | benign | -0.021 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | I |
V/S | 0.2502 | likely_benign | 0.2184 | benign | -0.789 | Destabilizing | 0.998 | D | 0.725 | prob.delet. | None | None | None | None | I |
V/T | 0.1968 | likely_benign | 0.177 | benign | -0.76 | Destabilizing | 0.983 | D | 0.659 | neutral | None | None | None | None | I |
V/W | 0.8076 | likely_pathogenic | 0.7843 | pathogenic | -0.746 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
V/Y | 0.521 | ambiguous | 0.4939 | ambiguous | -0.455 | Destabilizing | 0.999 | D | 0.675 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.