Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC630419135;19136;19137 chr2:178729128;178729127;178729126chr2:179593855;179593854;179593853
N2AB598718184;18185;18186 chr2:178729128;178729127;178729126chr2:179593855;179593854;179593853
N2A506015403;15404;15405 chr2:178729128;178729127;178729126chr2:179593855;179593854;179593853
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: V
  • RefSeq wild type transcript codon: GTT
  • RefSeq wild type template codon: CAA
  • Domain: Ig-47
  • Domain position: 13
  • Structural Position: 18
  • Q(SASA): 0.5678
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
V/I None None 0.117 N 0.309 0.08 0.427368086475 gnomAD-4.0.0 6.88716E-07 None None None None I None 0 0 None 0 0 None 0 0 9.02961E-07 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
V/A 0.2078 likely_benign 0.1842 benign -0.683 Destabilizing 0.977 D 0.548 neutral N 0.509006462 None None I
V/C 0.8232 likely_pathogenic 0.8025 pathogenic -0.73 Destabilizing 1.0 D 0.639 neutral None None None None I
V/D 0.4389 ambiguous 0.3607 ambiguous -0.101 Destabilizing 0.999 D 0.754 deleterious D 0.527477579 None None I
V/E 0.2848 likely_benign 0.2516 benign -0.181 Destabilizing 0.999 D 0.715 prob.delet. None None None None I
V/F 0.1395 likely_benign 0.1293 benign -0.672 Destabilizing 0.993 D 0.668 neutral N 0.497809557 None None I
V/G 0.3038 likely_benign 0.2569 benign -0.87 Destabilizing 0.999 D 0.727 prob.delet. N 0.486426798 None None I
V/H 0.5893 likely_pathogenic 0.5514 ambiguous -0.322 Destabilizing 1.0 D 0.737 prob.delet. None None None None I
V/I 0.0734 likely_benign 0.0737 benign -0.326 Destabilizing 0.117 N 0.309 neutral N 0.490652774 None None I
V/K 0.3474 ambiguous 0.3184 benign -0.522 Destabilizing 0.998 D 0.719 prob.delet. None None None None I
V/L 0.1407 likely_benign 0.1407 benign -0.326 Destabilizing 0.898 D 0.559 neutral N 0.455558766 None None I
V/M 0.1168 likely_benign 0.1142 benign -0.37 Destabilizing 0.995 D 0.672 neutral None None None None I
V/N 0.3087 likely_benign 0.2646 benign -0.311 Destabilizing 0.999 D 0.754 deleterious None None None None I
V/P 0.5377 ambiguous 0.5136 ambiguous -0.408 Destabilizing 0.999 D 0.74 deleterious None None None None I
V/Q 0.3199 likely_benign 0.2979 benign -0.515 Destabilizing 0.999 D 0.737 prob.delet. None None None None I
V/R 0.3183 likely_benign 0.3095 benign -0.021 Destabilizing 0.999 D 0.753 deleterious None None None None I
V/S 0.2502 likely_benign 0.2184 benign -0.789 Destabilizing 0.998 D 0.725 prob.delet. None None None None I
V/T 0.1968 likely_benign 0.177 benign -0.76 Destabilizing 0.983 D 0.659 neutral None None None None I
V/W 0.8076 likely_pathogenic 0.7843 pathogenic -0.746 Destabilizing 1.0 D 0.729 prob.delet. None None None None I
V/Y 0.521 ambiguous 0.4939 ambiguous -0.455 Destabilizing 0.999 D 0.675 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.