Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6319 | 19180;19181;19182 | chr2:178729083;178729082;178729081 | chr2:179593810;179593809;179593808 |
N2AB | 6002 | 18229;18230;18231 | chr2:178729083;178729082;178729081 | chr2:179593810;179593809;179593808 |
N2A | 5075 | 15448;15449;15450 | chr2:178729083;178729082;178729081 | chr2:179593810;179593809;179593808 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs2079901596 | None | 0.032 | D | 0.321 | 0.517 | 0.638853250657 | gnomAD-4.0.0 | 1.59475E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02994E-05 |
P/S | rs749058126 | -0.086 | 0.942 | D | 0.4 | 0.558 | 0.487772906946 | gnomAD-2.1.1 | 8.17E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.81E-05 | 0 |
P/S | rs749058126 | -0.086 | 0.942 | D | 0.4 | 0.558 | 0.487772906946 | gnomAD-4.0.0 | 2.05466E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.60982E-05 | 0 | 1.65837E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0762 | likely_benign | 0.0698 | benign | -0.394 | Destabilizing | 0.822 | D | 0.425 | neutral | N | 0.499243086 | None | None | I |
P/C | 0.4253 | ambiguous | 0.4032 | ambiguous | -0.803 | Destabilizing | 0.998 | D | 0.613 | neutral | None | None | None | None | I |
P/D | 0.3251 | likely_benign | 0.2823 | benign | -0.423 | Destabilizing | 0.956 | D | 0.405 | neutral | None | None | None | None | I |
P/E | 0.179 | likely_benign | 0.167 | benign | -0.538 | Destabilizing | 0.754 | D | 0.441 | neutral | None | None | None | None | I |
P/F | 0.265 | likely_benign | 0.2337 | benign | -0.746 | Destabilizing | 0.915 | D | 0.581 | neutral | None | None | None | None | I |
P/G | 0.275 | likely_benign | 0.2452 | benign | -0.46 | Destabilizing | 0.956 | D | 0.417 | neutral | None | None | None | None | I |
P/H | 0.1088 | likely_benign | 0.0986 | benign | -0.033 | Destabilizing | 0.992 | D | 0.479 | neutral | D | 0.593669589 | None | None | I |
P/I | 0.2086 | likely_benign | 0.1841 | benign | -0.362 | Destabilizing | 0.915 | D | 0.558 | neutral | None | None | None | None | I |
P/K | 0.1621 | likely_benign | 0.1521 | benign | -0.46 | Destabilizing | 0.915 | D | 0.401 | neutral | None | None | None | None | I |
P/L | 0.0784 | likely_benign | 0.0736 | benign | -0.362 | Destabilizing | 0.032 | N | 0.321 | neutral | D | 0.550254799 | None | None | I |
P/M | 0.2222 | likely_benign | 0.1983 | benign | -0.613 | Destabilizing | 0.988 | D | 0.487 | neutral | None | None | None | None | I |
P/N | 0.2352 | likely_benign | 0.2046 | benign | -0.263 | Destabilizing | 0.956 | D | 0.492 | neutral | None | None | None | None | I |
P/Q | 0.0947 | likely_benign | 0.0883 | benign | -0.478 | Destabilizing | 0.16 | N | 0.317 | neutral | None | None | None | None | I |
P/R | 0.1106 | likely_benign | 0.1068 | benign | 0.01 | Stabilizing | 0.89 | D | 0.501 | neutral | D | 0.58026476 | None | None | I |
P/S | 0.0919 | likely_benign | 0.0846 | benign | -0.559 | Destabilizing | 0.942 | D | 0.4 | neutral | D | 0.530171678 | None | None | I |
P/T | 0.098 | likely_benign | 0.0876 | benign | -0.583 | Destabilizing | 0.942 | D | 0.405 | neutral | D | 0.54985119 | None | None | I |
P/V | 0.1586 | likely_benign | 0.1424 | benign | -0.344 | Destabilizing | 0.754 | D | 0.427 | neutral | None | None | None | None | I |
P/W | 0.4495 | ambiguous | 0.41 | ambiguous | -0.804 | Destabilizing | 0.998 | D | 0.631 | neutral | None | None | None | None | I |
P/Y | 0.2473 | likely_benign | 0.2275 | benign | -0.535 | Destabilizing | 0.978 | D | 0.583 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.