Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6322 | 19189;19190;19191 | chr2:178729074;178729073;178729072 | chr2:179593801;179593800;179593799 |
N2AB | 6005 | 18238;18239;18240 | chr2:178729074;178729073;178729072 | chr2:179593801;179593800;179593799 |
N2A | 5078 | 15457;15458;15459 | chr2:178729074;178729073;178729072 | chr2:179593801;179593800;179593799 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.001 | D | 0.351 | 0.369 | 0.435043484731 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0881 | likely_benign | 0.086 | benign | -0.627 | Destabilizing | 0.027 | N | 0.415 | neutral | N | 0.491786077 | None | None | I |
S/C | 0.1502 | likely_benign | 0.1543 | benign | -0.403 | Destabilizing | 0.915 | D | 0.513 | neutral | D | 0.546810085 | None | None | I |
S/D | 0.3042 | likely_benign | 0.3246 | benign | 0.202 | Stabilizing | 0.149 | N | 0.433 | neutral | None | None | None | None | I |
S/E | 0.3871 | ambiguous | 0.4172 | ambiguous | 0.217 | Stabilizing | 0.149 | N | 0.384 | neutral | None | None | None | None | I |
S/F | 0.1394 | likely_benign | 0.1276 | benign | -0.867 | Destabilizing | 0.001 | N | 0.351 | neutral | D | 0.523679401 | None | None | I |
S/G | 0.1418 | likely_benign | 0.1357 | benign | -0.877 | Destabilizing | 0.149 | N | 0.373 | neutral | None | None | None | None | I |
S/H | 0.2564 | likely_benign | 0.2706 | benign | -1.232 | Destabilizing | 0.935 | D | 0.519 | neutral | None | None | None | None | I |
S/I | 0.1598 | likely_benign | 0.1525 | benign | -0.071 | Destabilizing | 0.081 | N | 0.569 | neutral | None | None | None | None | I |
S/K | 0.5234 | ambiguous | 0.5663 | pathogenic | -0.443 | Destabilizing | 0.002 | N | 0.229 | neutral | None | None | None | None | I |
S/L | 0.1034 | likely_benign | 0.1047 | benign | -0.071 | Destabilizing | 0.001 | N | 0.383 | neutral | None | None | None | None | I |
S/M | 0.1862 | likely_benign | 0.1883 | benign | -0.035 | Destabilizing | 0.235 | N | 0.542 | neutral | None | None | None | None | I |
S/N | 0.1312 | likely_benign | 0.1377 | benign | -0.449 | Destabilizing | 0.149 | N | 0.451 | neutral | None | None | None | None | I |
S/P | 0.6896 | likely_pathogenic | 0.7269 | pathogenic | -0.222 | Destabilizing | 0.484 | N | 0.579 | neutral | D | 0.528198851 | None | None | I |
S/Q | 0.3885 | ambiguous | 0.4173 | ambiguous | -0.481 | Destabilizing | 0.38 | N | 0.469 | neutral | None | None | None | None | I |
S/R | 0.4292 | ambiguous | 0.455 | ambiguous | -0.415 | Destabilizing | 0.235 | N | 0.569 | neutral | None | None | None | None | I |
S/T | 0.0681 | likely_benign | 0.0705 | benign | -0.468 | Destabilizing | 0.002 | N | 0.236 | neutral | N | 0.472549803 | None | None | I |
S/V | 0.1604 | likely_benign | 0.1619 | benign | -0.222 | Destabilizing | 0.081 | N | 0.535 | neutral | None | None | None | None | I |
S/W | 0.309 | likely_benign | 0.3038 | benign | -0.898 | Destabilizing | 0.935 | D | 0.625 | neutral | None | None | None | None | I |
S/Y | 0.1358 | likely_benign | 0.1312 | benign | -0.588 | Destabilizing | 0.188 | N | 0.604 | neutral | N | 0.508448755 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.