Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6323 | 19192;19193;19194 | chr2:178729071;178729070;178729069 | chr2:179593798;179593797;179593796 |
N2AB | 6006 | 18241;18242;18243 | chr2:178729071;178729070;178729069 | chr2:179593798;179593797;179593796 |
N2A | 5079 | 15460;15461;15462 | chr2:178729071;178729070;178729069 | chr2:179593798;179593797;179593796 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs2079899039 | None | 0.004 | D | 0.399 | 0.084 | 0.424194796918 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/L | rs2079899039 | None | 0.004 | D | 0.399 | 0.084 | 0.424194796918 | gnomAD-4.0.0 | 1.86043E-06 | None | None | None | None | I | None | 2.67108E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.60246E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5172 | ambiguous | 0.5211 | ambiguous | -2.12 | Highly Destabilizing | 0.035 | N | 0.529 | neutral | None | None | None | None | I |
I/C | 0.7495 | likely_pathogenic | 0.7495 | pathogenic | -1.355 | Destabilizing | 0.824 | D | 0.685 | prob.neutral | None | None | None | None | I |
I/D | 0.9725 | likely_pathogenic | 0.9661 | pathogenic | -1.778 | Destabilizing | 0.555 | D | 0.775 | deleterious | None | None | None | None | I |
I/E | 0.9442 | likely_pathogenic | 0.9338 | pathogenic | -1.605 | Destabilizing | 0.555 | D | 0.771 | deleterious | None | None | None | None | I |
I/F | 0.2596 | likely_benign | 0.2691 | benign | -1.25 | Destabilizing | 0.38 | N | 0.599 | neutral | None | None | None | None | I |
I/G | 0.8692 | likely_pathogenic | 0.8592 | pathogenic | -2.626 | Highly Destabilizing | 0.149 | N | 0.755 | deleterious | None | None | None | None | I |
I/H | 0.8988 | likely_pathogenic | 0.8828 | pathogenic | -1.977 | Destabilizing | 0.935 | D | 0.801 | deleterious | None | None | None | None | I |
I/K | 0.8764 | likely_pathogenic | 0.8521 | pathogenic | -1.384 | Destabilizing | 0.117 | N | 0.771 | deleterious | D | 0.546955578 | None | None | I |
I/L | 0.1454 | likely_benign | 0.1456 | benign | -0.698 | Destabilizing | 0.004 | N | 0.399 | neutral | D | 0.525829714 | None | None | I |
I/M | 0.1379 | likely_benign | 0.142 | benign | -0.614 | Destabilizing | 0.004 | N | 0.439 | neutral | N | 0.506948407 | None | None | I |
I/N | 0.7768 | likely_pathogenic | 0.7533 | pathogenic | -1.523 | Destabilizing | 0.555 | D | 0.795 | deleterious | None | None | None | None | I |
I/P | 0.9069 | likely_pathogenic | 0.8958 | pathogenic | -1.147 | Destabilizing | 0.791 | D | 0.787 | deleterious | None | None | None | None | I |
I/Q | 0.8864 | likely_pathogenic | 0.8707 | pathogenic | -1.454 | Destabilizing | 0.38 | N | 0.803 | deleterious | None | None | None | None | I |
I/R | 0.8272 | likely_pathogenic | 0.8041 | pathogenic | -1.103 | Destabilizing | 0.317 | N | 0.797 | deleterious | N | 0.520457532 | None | None | I |
I/S | 0.6728 | likely_pathogenic | 0.65 | pathogenic | -2.291 | Highly Destabilizing | 0.081 | N | 0.723 | prob.delet. | None | None | None | None | I |
I/T | 0.4191 | ambiguous | 0.3617 | ambiguous | -1.969 | Destabilizing | 0.002 | N | 0.423 | neutral | D | 0.528344344 | None | None | I |
I/V | 0.0532 | likely_benign | 0.0557 | benign | -1.147 | Destabilizing | None | N | 0.199 | neutral | N | 0.396003456 | None | None | I |
I/W | 0.9305 | likely_pathogenic | 0.9232 | pathogenic | -1.528 | Destabilizing | 0.935 | D | 0.796 | deleterious | None | None | None | None | I |
I/Y | 0.7683 | likely_pathogenic | 0.7702 | pathogenic | -1.224 | Destabilizing | 0.555 | D | 0.709 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.