Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6334 | 19225;19226;19227 | chr2:178729038;178729037;178729036 | chr2:179593765;179593764;179593763 |
N2AB | 6017 | 18274;18275;18276 | chr2:178729038;178729037;178729036 | chr2:179593765;179593764;179593763 |
N2A | 5090 | 15493;15494;15495 | chr2:178729038;178729037;178729036 | chr2:179593765;179593764;179593763 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs755041916 | 0.041 | 0.001 | N | 0.152 | 0.073 | 0.313210971179 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
E/D | rs755041916 | 0.041 | 0.001 | N | 0.152 | 0.073 | 0.313210971179 | gnomAD-4.0.0 | 6.84613E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16063E-05 | 0 |
E/G | rs2079893948 | None | 0.193 | N | 0.344 | 0.277 | 0.49741755877 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1201 | likely_benign | 0.1178 | benign | -0.488 | Destabilizing | 0.09 | N | 0.321 | neutral | N | 0.511702837 | None | None | I |
E/C | 0.7781 | likely_pathogenic | 0.7888 | pathogenic | -0.211 | Destabilizing | 0.981 | D | 0.339 | neutral | None | None | None | None | I |
E/D | 0.1325 | likely_benign | 0.138 | benign | -0.528 | Destabilizing | 0.001 | N | 0.152 | neutral | N | 0.508086529 | None | None | I |
E/F | 0.6729 | likely_pathogenic | 0.6966 | pathogenic | -0.12 | Destabilizing | 0.932 | D | 0.319 | neutral | None | None | None | None | I |
E/G | 0.1069 | likely_benign | 0.1034 | benign | -0.74 | Destabilizing | 0.193 | N | 0.344 | neutral | N | 0.490229141 | None | None | I |
E/H | 0.3791 | ambiguous | 0.3898 | ambiguous | 0.088 | Stabilizing | 0.818 | D | 0.259 | neutral | None | None | None | None | I |
E/I | 0.3396 | likely_benign | 0.3473 | ambiguous | 0.162 | Stabilizing | 0.818 | D | 0.342 | neutral | None | None | None | None | I |
E/K | 0.0805 | likely_benign | 0.0814 | benign | 0.196 | Stabilizing | 0.001 | N | 0.173 | neutral | N | 0.501621446 | None | None | I |
E/L | 0.376 | ambiguous | 0.3861 | ambiguous | 0.162 | Stabilizing | 0.388 | N | 0.361 | neutral | None | None | None | None | I |
E/M | 0.3934 | ambiguous | 0.4029 | ambiguous | 0.235 | Stabilizing | 0.981 | D | 0.309 | neutral | None | None | None | None | I |
E/N | 0.205 | likely_benign | 0.2075 | benign | -0.332 | Destabilizing | 0.002 | N | 0.176 | neutral | None | None | None | None | I |
E/P | 0.4002 | ambiguous | 0.3876 | ambiguous | -0.033 | Destabilizing | 0.818 | D | 0.317 | neutral | None | None | None | None | I |
E/Q | 0.1217 | likely_benign | 0.1183 | benign | -0.248 | Destabilizing | 0.006 | N | 0.183 | neutral | D | 0.531635392 | None | None | I |
E/R | 0.1536 | likely_benign | 0.1569 | benign | 0.492 | Stabilizing | 0.241 | N | 0.263 | neutral | None | None | None | None | I |
E/S | 0.1562 | likely_benign | 0.1596 | benign | -0.483 | Destabilizing | 0.116 | N | 0.251 | neutral | None | None | None | None | I |
E/T | 0.1687 | likely_benign | 0.1661 | benign | -0.267 | Destabilizing | 0.388 | N | 0.319 | neutral | None | None | None | None | I |
E/V | 0.2007 | likely_benign | 0.2065 | benign | -0.033 | Destabilizing | 0.324 | N | 0.373 | neutral | N | 0.49310275 | None | None | I |
E/W | 0.8278 | likely_pathogenic | 0.8368 | pathogenic | 0.112 | Stabilizing | 0.981 | D | 0.42 | neutral | None | None | None | None | I |
E/Y | 0.5279 | ambiguous | 0.5476 | ambiguous | 0.144 | Stabilizing | 0.932 | D | 0.316 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.