Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6348 | 19267;19268;19269 | chr2:178728996;178728995;178728994 | chr2:179593723;179593722;179593721 |
N2AB | 6031 | 18316;18317;18318 | chr2:178728996;178728995;178728994 | chr2:179593723;179593722;179593721 |
N2A | 5104 | 15535;15536;15537 | chr2:178728996;178728995;178728994 | chr2:179593723;179593722;179593721 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | None | None | 0.062 | N | 0.53 | 0.346 | 0.406668915854 | gnomAD-4.0.0 | 1.59304E-06 | None | None | None | None | I | None | 0 | 2.29085E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0826 | likely_benign | 0.085 | benign | -1.32 | Destabilizing | None | N | 0.319 | neutral | N | 0.498435576 | None | None | I |
T/C | 0.3389 | likely_benign | 0.3552 | ambiguous | -0.949 | Destabilizing | 0.824 | D | 0.566 | neutral | None | None | None | None | I |
T/D | 0.4016 | ambiguous | 0.4254 | ambiguous | -1.792 | Destabilizing | 0.38 | N | 0.568 | neutral | None | None | None | None | I |
T/E | 0.2699 | likely_benign | 0.2854 | benign | -1.563 | Destabilizing | 0.149 | N | 0.551 | neutral | None | None | None | None | I |
T/F | 0.163 | likely_benign | 0.165 | benign | -0.916 | Destabilizing | 0.555 | D | 0.594 | neutral | None | None | None | None | I |
T/G | 0.2717 | likely_benign | 0.2825 | benign | -1.735 | Destabilizing | 0.081 | N | 0.569 | neutral | None | None | None | None | I |
T/H | 0.1827 | likely_benign | 0.1881 | benign | -1.765 | Destabilizing | 0.824 | D | 0.605 | neutral | None | None | None | None | I |
T/I | 0.109 | likely_benign | 0.1191 | benign | -0.215 | Destabilizing | 0.002 | N | 0.391 | neutral | D | 0.53895094 | None | None | I |
T/K | 0.1453 | likely_benign | 0.1581 | benign | -0.518 | Destabilizing | 0.062 | N | 0.53 | neutral | N | 0.493965351 | None | None | I |
T/L | 0.0838 | likely_benign | 0.0841 | benign | -0.215 | Destabilizing | 0.035 | N | 0.489 | neutral | None | None | None | None | I |
T/M | 0.0832 | likely_benign | 0.086 | benign | -0.371 | Destabilizing | 0.555 | D | 0.576 | neutral | None | None | None | None | I |
T/N | 0.1257 | likely_benign | 0.1287 | benign | -1.278 | Destabilizing | 0.38 | N | 0.547 | neutral | None | None | None | None | I |
T/P | 0.7023 | likely_pathogenic | 0.7221 | pathogenic | -0.555 | Destabilizing | 0.317 | N | 0.568 | neutral | D | 0.542090052 | None | None | I |
T/Q | 0.1822 | likely_benign | 0.1943 | benign | -0.997 | Destabilizing | 0.38 | N | 0.573 | neutral | None | None | None | None | I |
T/R | 0.1107 | likely_benign | 0.1218 | benign | -0.79 | Destabilizing | 0.001 | N | 0.422 | neutral | D | 0.538641509 | None | None | I |
T/S | 0.0965 | likely_benign | 0.0999 | benign | -1.476 | Destabilizing | 0.002 | N | 0.468 | neutral | N | 0.474859389 | None | None | I |
T/V | 0.0914 | likely_benign | 0.1017 | benign | -0.555 | Destabilizing | 0.035 | N | 0.483 | neutral | None | None | None | None | I |
T/W | 0.5065 | ambiguous | 0.5033 | ambiguous | -1.118 | Destabilizing | 0.935 | D | 0.666 | neutral | None | None | None | None | I |
T/Y | 0.1996 | likely_benign | 0.2086 | benign | -0.717 | Destabilizing | 0.555 | D | 0.605 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.