Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6350 | 19273;19274;19275 | chr2:178728990;178728989;178728988 | chr2:179593717;179593716;179593715 |
N2AB | 6033 | 18322;18323;18324 | chr2:178728990;178728989;178728988 | chr2:179593717;179593716;179593715 |
N2A | 5106 | 15541;15542;15543 | chr2:178728990;178728989;178728988 | chr2:179593717;179593716;179593715 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs113892821 | -1.139 | 0.786 | N | 0.448 | 0.173 | 0.176091768786 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 1.17924E-03 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Q/H | rs113892821 | -1.139 | 0.786 | N | 0.448 | 0.173 | 0.176091768786 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Q/H | rs113892821 | -1.139 | 0.786 | N | 0.448 | 0.173 | 0.176091768786 | gnomAD-4.0.0 | 1.23992E-06 | None | None | None | None | N | None | 0 | 1.66939E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 1.09859E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2766 | likely_benign | 0.2842 | benign | -0.92 | Destabilizing | 0.2 | N | 0.353 | neutral | None | None | None | None | N |
Q/C | 0.5566 | ambiguous | 0.5609 | ambiguous | -0.315 | Destabilizing | 0.991 | D | 0.547 | neutral | None | None | None | None | N |
Q/D | 0.3974 | ambiguous | 0.418 | ambiguous | -0.681 | Destabilizing | 0.223 | N | 0.409 | neutral | None | None | None | None | N |
Q/E | 0.09 | likely_benign | 0.0899 | benign | -0.525 | Destabilizing | 0.006 | N | 0.244 | neutral | N | 0.506582232 | None | None | N |
Q/F | 0.5601 | ambiguous | 0.5779 | pathogenic | -0.543 | Destabilizing | 0.41 | N | 0.554 | neutral | None | None | None | None | N |
Q/G | 0.3459 | ambiguous | 0.3585 | ambiguous | -1.304 | Destabilizing | 0.365 | N | 0.433 | neutral | None | None | None | None | N |
Q/H | 0.1506 | likely_benign | 0.1546 | benign | -1.023 | Destabilizing | 0.786 | D | 0.448 | neutral | N | 0.472683089 | None | None | N |
Q/I | 0.3338 | likely_benign | 0.3408 | ambiguous | 0.086 | Stabilizing | 0.582 | D | 0.548 | neutral | None | None | None | None | N |
Q/K | 0.0928 | likely_benign | 0.0919 | benign | -0.229 | Destabilizing | None | N | 0.271 | neutral | N | 0.481513216 | None | None | N |
Q/L | 0.1487 | likely_benign | 0.1526 | benign | 0.086 | Stabilizing | 0.178 | N | 0.406 | neutral | N | 0.515548432 | None | None | N |
Q/M | 0.3511 | ambiguous | 0.3614 | ambiguous | 0.469 | Stabilizing | 0.968 | D | 0.414 | neutral | None | None | None | None | N |
Q/N | 0.281 | likely_benign | 0.2932 | benign | -0.864 | Destabilizing | 0.365 | N | 0.444 | neutral | None | None | None | None | N |
Q/P | 0.7706 | likely_pathogenic | 0.7977 | pathogenic | -0.22 | Destabilizing | 0.68 | D | 0.525 | neutral | D | 0.52948539 | None | None | N |
Q/R | 0.0938 | likely_benign | 0.0951 | benign | -0.25 | Destabilizing | 0.001 | N | 0.281 | neutral | N | 0.495671805 | None | None | N |
Q/S | 0.2748 | likely_benign | 0.2788 | benign | -1.111 | Destabilizing | 0.111 | N | 0.374 | neutral | None | None | None | None | N |
Q/T | 0.1889 | likely_benign | 0.191 | benign | -0.746 | Destabilizing | 0.008 | N | 0.27 | neutral | None | None | None | None | N |
Q/V | 0.2468 | likely_benign | 0.248 | benign | -0.22 | Destabilizing | 0.365 | N | 0.452 | neutral | None | None | None | None | N |
Q/W | 0.4092 | ambiguous | 0.4206 | ambiguous | -0.351 | Destabilizing | 0.908 | D | 0.54 | neutral | None | None | None | None | N |
Q/Y | 0.3483 | ambiguous | 0.3618 | ambiguous | -0.102 | Destabilizing | 0.002 | N | 0.27 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.