Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6354 | 19285;19286;19287 | chr2:178728978;178728977;178728976 | chr2:179593705;179593704;179593703 |
N2AB | 6037 | 18334;18335;18336 | chr2:178728978;178728977;178728976 | chr2:179593705;179593704;179593703 |
N2A | 5110 | 15553;15554;15555 | chr2:178728978;178728977;178728976 | chr2:179593705;179593704;179593703 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs754383943 | -1.602 | 0.998 | D | 0.564 | 0.495 | 0.668719517119 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/M | rs754383943 | -1.602 | 0.998 | D | 0.564 | 0.495 | 0.668719517119 | gnomAD-4.0.0 | 6.57358E-06 | None | None | None | None | N | None | 2.41348E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2215 | likely_benign | 0.1962 | benign | -1.907 | Destabilizing | 0.91 | D | 0.459 | neutral | N | 0.468221419 | None | None | N |
V/C | 0.8791 | likely_pathogenic | 0.8672 | pathogenic | -2.555 | Highly Destabilizing | 0.092 | N | 0.393 | neutral | None | None | None | None | N |
V/D | 0.9487 | likely_pathogenic | 0.9466 | pathogenic | -3.039 | Highly Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
V/E | 0.9146 | likely_pathogenic | 0.9118 | pathogenic | -2.941 | Highly Destabilizing | 0.998 | D | 0.639 | neutral | D | 0.558058394 | None | None | N |
V/F | 0.6508 | likely_pathogenic | 0.6813 | pathogenic | -1.547 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
V/G | 0.5551 | ambiguous | 0.5616 | ambiguous | -2.261 | Highly Destabilizing | 0.994 | D | 0.669 | neutral | D | 0.558058394 | None | None | N |
V/H | 0.9745 | likely_pathogenic | 0.9745 | pathogenic | -1.716 | Destabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | N |
V/I | 0.0927 | likely_benign | 0.085 | benign | -0.971 | Destabilizing | 0.965 | D | 0.522 | neutral | None | None | None | None | N |
V/K | 0.9484 | likely_pathogenic | 0.9494 | pathogenic | -1.778 | Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | N |
V/L | 0.443 | ambiguous | 0.3968 | ambiguous | -0.971 | Destabilizing | 0.91 | D | 0.472 | neutral | N | 0.514073926 | None | None | N |
V/M | 0.3432 | ambiguous | 0.3184 | benign | -1.343 | Destabilizing | 0.998 | D | 0.564 | neutral | D | 0.53944716 | None | None | N |
V/N | 0.865 | likely_pathogenic | 0.8476 | pathogenic | -2.077 | Highly Destabilizing | 0.999 | D | 0.688 | prob.neutral | None | None | None | None | N |
V/P | 0.82 | likely_pathogenic | 0.8618 | pathogenic | -1.257 | Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | N |
V/Q | 0.9218 | likely_pathogenic | 0.9209 | pathogenic | -2.189 | Highly Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
V/R | 0.9183 | likely_pathogenic | 0.9244 | pathogenic | -1.34 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | N |
V/S | 0.5259 | ambiguous | 0.4814 | ambiguous | -2.586 | Highly Destabilizing | 0.985 | D | 0.62 | neutral | None | None | None | None | N |
V/T | 0.2844 | likely_benign | 0.2457 | benign | -2.371 | Highly Destabilizing | 0.985 | D | 0.555 | neutral | None | None | None | None | N |
V/W | 0.9868 | likely_pathogenic | 0.9883 | pathogenic | -1.808 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
V/Y | 0.9634 | likely_pathogenic | 0.9666 | pathogenic | -1.475 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.