Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6365 | 19318;19319;19320 | chr2:178728945;178728944;178728943 | chr2:179593672;179593671;179593670 |
N2AB | 6048 | 18367;18368;18369 | chr2:178728945;178728944;178728943 | chr2:179593672;179593671;179593670 |
N2A | 5121 | 15586;15587;15588 | chr2:178728945;178728944;178728943 | chr2:179593672;179593671;179593670 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | rs762632541 | -0.232 | 0.961 | N | 0.582 | 0.338 | 0.359963025489 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
Q/R | rs762632541 | -0.232 | 0.961 | N | 0.582 | 0.338 | 0.359963025489 | gnomAD-4.0.0 | 1.59546E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77979E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.4614 | ambiguous | 0.4764 | ambiguous | -0.852 | Destabilizing | 0.985 | D | 0.633 | neutral | None | None | None | None | N |
Q/C | 0.7977 | likely_pathogenic | 0.8023 | pathogenic | -0.503 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
Q/D | 0.7645 | likely_pathogenic | 0.8062 | pathogenic | -1.64 | Destabilizing | 0.993 | D | 0.566 | neutral | None | None | None | None | N |
Q/E | 0.0914 | likely_benign | 0.0983 | benign | -1.457 | Destabilizing | 0.953 | D | 0.469 | neutral | N | 0.491519566 | None | None | N |
Q/F | 0.7311 | likely_pathogenic | 0.7571 | pathogenic | -0.39 | Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | N |
Q/G | 0.6993 | likely_pathogenic | 0.7276 | pathogenic | -1.257 | Destabilizing | 0.993 | D | 0.705 | prob.neutral | None | None | None | None | N |
Q/H | 0.3422 | ambiguous | 0.3849 | ambiguous | -1.021 | Destabilizing | 0.999 | D | 0.619 | neutral | N | 0.507510476 | None | None | N |
Q/I | 0.3183 | likely_benign | 0.325 | benign | 0.217 | Stabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
Q/K | 0.1567 | likely_benign | 0.1663 | benign | -0.603 | Destabilizing | 0.4 | N | 0.382 | neutral | N | 0.519762173 | None | None | N |
Q/L | 0.1669 | likely_benign | 0.1828 | benign | 0.217 | Stabilizing | 0.99 | D | 0.705 | prob.neutral | D | 0.525864213 | None | None | N |
Q/M | 0.3801 | ambiguous | 0.4033 | ambiguous | 0.527 | Stabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | N |
Q/N | 0.6126 | likely_pathogenic | 0.6529 | pathogenic | -1.336 | Destabilizing | 0.993 | D | 0.587 | neutral | None | None | None | None | N |
Q/P | 0.9636 | likely_pathogenic | 0.9766 | pathogenic | -0.11 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | D | 0.541743976 | None | None | N |
Q/R | 0.1557 | likely_benign | 0.1724 | benign | -0.595 | Destabilizing | 0.961 | D | 0.582 | neutral | N | 0.500677767 | None | None | N |
Q/S | 0.522 | ambiguous | 0.5472 | ambiguous | -1.466 | Destabilizing | 0.985 | D | 0.579 | neutral | None | None | None | None | N |
Q/T | 0.3411 | ambiguous | 0.3481 | ambiguous | -1.095 | Destabilizing | 0.993 | D | 0.668 | neutral | None | None | None | None | N |
Q/V | 0.2312 | likely_benign | 0.242 | benign | -0.11 | Destabilizing | 0.998 | D | 0.743 | deleterious | None | None | None | None | N |
Q/W | 0.6844 | likely_pathogenic | 0.711 | pathogenic | -0.353 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
Q/Y | 0.5672 | likely_pathogenic | 0.6078 | pathogenic | -0.038 | Destabilizing | 0.999 | D | 0.716 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.