Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6389 | 19390;19391;19392 | chr2:178728761;178728760;178728759 | chr2:179593488;179593487;179593486 |
N2AB | 6072 | 18439;18440;18441 | chr2:178728761;178728760;178728759 | chr2:179593488;179593487;179593486 |
N2A | 5145 | 15658;15659;15660 | chr2:178728761;178728760;178728759 | chr2:179593488;179593487;179593486 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs1256437537 | 0.021 | 0.983 | D | 0.589 | 0.223 | 0.350524144436 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs1256437537 | 0.021 | 0.983 | D | 0.589 | 0.223 | 0.350524144436 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/Q | rs1256437537 | 0.021 | 0.983 | D | 0.589 | 0.223 | 0.350524144436 | gnomAD-4.0.0 | 2.49858E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.24588E-05 | None | 0 | 0 | 1.71006E-06 | 1.10514E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3121 | likely_benign | 0.2831 | benign | -0.415 | Destabilizing | 0.892 | D | 0.597 | neutral | N | 0.502240102 | None | None | N |
E/C | 0.9402 | likely_pathogenic | 0.9349 | pathogenic | -0.153 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
E/D | 0.2442 | likely_benign | 0.1964 | benign | -0.453 | Destabilizing | 0.011 | N | 0.139 | neutral | N | 0.496670695 | None | None | N |
E/F | 0.9074 | likely_pathogenic | 0.8889 | pathogenic | -0.159 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
E/G | 0.2952 | likely_benign | 0.2559 | benign | -0.64 | Destabilizing | 0.892 | D | 0.539 | neutral | N | 0.514356876 | None | None | N |
E/H | 0.6423 | likely_pathogenic | 0.5971 | pathogenic | 0.102 | Stabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | N |
E/I | 0.6782 | likely_pathogenic | 0.6265 | pathogenic | 0.151 | Stabilizing | 0.987 | D | 0.694 | prob.neutral | None | None | None | None | N |
E/K | 0.2131 | likely_benign | 0.1938 | benign | 0.254 | Stabilizing | 0.892 | D | 0.549 | neutral | N | 0.514105637 | None | None | N |
E/L | 0.6711 | likely_pathogenic | 0.6366 | pathogenic | 0.151 | Stabilizing | 0.987 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/M | 0.7086 | likely_pathogenic | 0.6814 | pathogenic | 0.201 | Stabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
E/N | 0.4698 | ambiguous | 0.39 | ambiguous | -0.193 | Destabilizing | 0.95 | D | 0.608 | neutral | None | None | None | None | N |
E/P | 0.9621 | likely_pathogenic | 0.9642 | pathogenic | -0.017 | Destabilizing | 0.987 | D | 0.702 | prob.neutral | None | None | None | None | N |
E/Q | 0.1665 | likely_benign | 0.154 | benign | -0.132 | Destabilizing | 0.983 | D | 0.589 | neutral | D | 0.528090868 | None | None | N |
E/R | 0.3508 | ambiguous | 0.3283 | benign | 0.53 | Stabilizing | 0.987 | D | 0.675 | neutral | None | None | None | None | N |
E/S | 0.3456 | ambiguous | 0.2999 | benign | -0.34 | Destabilizing | 0.916 | D | 0.553 | neutral | None | None | None | None | N |
E/T | 0.3722 | ambiguous | 0.3204 | benign | -0.152 | Destabilizing | 0.975 | D | 0.641 | neutral | None | None | None | None | N |
E/V | 0.4305 | ambiguous | 0.3954 | ambiguous | -0.017 | Destabilizing | 0.983 | D | 0.674 | neutral | N | 0.484237979 | None | None | N |
E/W | 0.949 | likely_pathogenic | 0.9441 | pathogenic | 0.034 | Stabilizing | 0.999 | D | 0.684 | prob.neutral | None | None | None | None | N |
E/Y | 0.8222 | likely_pathogenic | 0.7942 | pathogenic | 0.095 | Stabilizing | 0.999 | D | 0.655 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.