Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6395 | 19408;19409;19410 | chr2:178728743;178728742;178728741 | chr2:179593470;179593469;179593468 |
N2AB | 6078 | 18457;18458;18459 | chr2:178728743;178728742;178728741 | chr2:179593470;179593469;179593468 |
N2A | 5151 | 15676;15677;15678 | chr2:178728743;178728742;178728741 | chr2:179593470;179593469;179593468 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.27 | N | 0.323 | 0.172 | 0.225902525712 | gnomAD-4.0.0 | 6.87558E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.04225E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1962 | likely_benign | 0.14 | benign | -0.264 | Destabilizing | 0.27 | N | 0.298 | neutral | N | 0.453961255 | None | None | N |
D/C | 0.7965 | likely_pathogenic | 0.6029 | pathogenic | -0.129 | Destabilizing | 0.995 | D | 0.291 | neutral | None | None | None | None | N |
D/E | 0.1875 | likely_benign | 0.1481 | benign | -0.34 | Destabilizing | 0.27 | N | 0.255 | neutral | N | 0.423136916 | None | None | N |
D/F | 0.612 | likely_pathogenic | 0.4945 | ambiguous | 0.015 | Stabilizing | 0.981 | D | 0.325 | neutral | None | None | None | None | N |
D/G | 0.3291 | likely_benign | 0.2472 | benign | -0.504 | Destabilizing | 0.27 | N | 0.323 | neutral | N | 0.502485921 | None | None | N |
D/H | 0.3447 | ambiguous | 0.2396 | benign | 0.164 | Stabilizing | 0.927 | D | 0.316 | neutral | N | 0.487575184 | None | None | N |
D/I | 0.3629 | ambiguous | 0.2574 | benign | 0.332 | Stabilizing | 0.944 | D | 0.381 | neutral | None | None | None | None | N |
D/K | 0.4425 | ambiguous | 0.3217 | benign | 0.244 | Stabilizing | 0.001 | N | 0.137 | neutral | None | None | None | None | N |
D/L | 0.3982 | ambiguous | 0.2923 | benign | 0.332 | Stabilizing | 0.704 | D | 0.378 | neutral | None | None | None | None | N |
D/M | 0.5974 | likely_pathogenic | 0.4721 | ambiguous | 0.356 | Stabilizing | 0.981 | D | 0.303 | neutral | None | None | None | None | N |
D/N | 0.1174 | likely_benign | 0.0956 | benign | -0.223 | Destabilizing | 0.002 | N | 0.094 | neutral | N | 0.415232296 | None | None | N |
D/P | 0.7887 | likely_pathogenic | 0.6758 | pathogenic | 0.157 | Stabilizing | 0.828 | D | 0.351 | neutral | None | None | None | None | N |
D/Q | 0.3976 | ambiguous | 0.2953 | benign | -0.15 | Destabilizing | 0.704 | D | 0.182 | neutral | None | None | None | None | N |
D/R | 0.4908 | ambiguous | 0.3635 | ambiguous | 0.483 | Stabilizing | 0.543 | D | 0.317 | neutral | None | None | None | None | N |
D/S | 0.1466 | likely_benign | 0.1183 | benign | -0.322 | Destabilizing | 0.013 | N | 0.087 | neutral | None | None | None | None | N |
D/T | 0.2399 | likely_benign | 0.1766 | benign | -0.127 | Destabilizing | 0.329 | N | 0.285 | neutral | None | None | None | None | N |
D/V | 0.2096 | likely_benign | 0.146 | benign | 0.157 | Stabilizing | 0.642 | D | 0.389 | neutral | N | 0.445475058 | None | None | N |
D/W | 0.8934 | likely_pathogenic | 0.8304 | pathogenic | 0.195 | Stabilizing | 0.995 | D | 0.363 | neutral | None | None | None | None | N |
D/Y | 0.2701 | likely_benign | 0.198 | benign | 0.266 | Stabilizing | 0.975 | D | 0.328 | neutral | N | 0.475627394 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.