Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6397 | 19414;19415;19416 | chr2:178728737;178728736;178728735 | chr2:179593464;179593463;179593462 |
N2AB | 6080 | 18463;18464;18465 | chr2:178728737;178728736;178728735 | chr2:179593464;179593463;179593462 |
N2A | 5153 | 15682;15683;15684 | chr2:178728737;178728736;178728735 | chr2:179593464;179593463;179593462 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/M | rs199564845 | 0.039 | 1.0 | D | 0.633 | 0.422 | None | gnomAD-2.1.1 | 2.82E-05 | None | None | None | None | N | None | 1.29349E-04 | 8.74E-05 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
T/M | rs199564845 | 0.039 | 1.0 | D | 0.633 | 0.422 | None | gnomAD-3.1.2 | 5.92E-05 | None | None | None | None | N | None | 4.83E-05 | 1.96489E-04 | 0 | 0 | 0 | None | 0 | 0 | 5.88E-05 | 0 | 0 |
T/M | rs199564845 | 0.039 | 1.0 | D | 0.633 | 0.422 | None | gnomAD-4.0.0 | 2.79825E-05 | None | None | None | None | N | None | 9.35404E-05 | 8.35478E-05 | None | 0 | 0 | None | 1.56392E-05 | 0 | 2.63781E-05 | 0 | 1.60679E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2264 | likely_benign | 0.2155 | benign | -0.547 | Destabilizing | 0.981 | D | 0.544 | neutral | N | 0.509334536 | None | None | N |
T/C | 0.8545 | likely_pathogenic | 0.7967 | pathogenic | -0.364 | Destabilizing | 1.0 | D | 0.622 | neutral | None | None | None | None | N |
T/D | 0.8184 | likely_pathogenic | 0.8555 | pathogenic | 0.17 | Stabilizing | 0.999 | D | 0.607 | neutral | None | None | None | None | N |
T/E | 0.6583 | likely_pathogenic | 0.7182 | pathogenic | 0.147 | Stabilizing | 0.999 | D | 0.602 | neutral | None | None | None | None | N |
T/F | 0.6546 | likely_pathogenic | 0.7038 | pathogenic | -0.702 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
T/G | 0.6124 | likely_pathogenic | 0.627 | pathogenic | -0.772 | Destabilizing | 0.997 | D | 0.615 | neutral | None | None | None | None | N |
T/H | 0.7021 | likely_pathogenic | 0.714 | pathogenic | -1.005 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
T/I | 0.5262 | ambiguous | 0.623 | pathogenic | -0.055 | Destabilizing | 1.0 | D | 0.636 | neutral | None | None | None | None | N |
T/K | 0.4007 | ambiguous | 0.4969 | ambiguous | -0.543 | Destabilizing | 1.0 | D | 0.609 | neutral | N | 0.521031609 | None | None | N |
T/L | 0.2086 | likely_benign | 0.2564 | benign | -0.055 | Destabilizing | 0.998 | D | 0.579 | neutral | None | None | None | None | N |
T/M | 0.1471 | likely_benign | 0.1773 | benign | 0.061 | Stabilizing | 1.0 | D | 0.633 | neutral | D | 0.534155622 | None | None | N |
T/N | 0.434 | ambiguous | 0.4588 | ambiguous | -0.411 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
T/P | 0.4019 | ambiguous | 0.3651 | ambiguous | -0.187 | Destabilizing | 0.999 | D | 0.62 | neutral | D | 0.526882933 | None | None | N |
T/Q | 0.4952 | ambiguous | 0.5439 | ambiguous | -0.564 | Destabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | N |
T/R | 0.3296 | likely_benign | 0.3843 | ambiguous | -0.305 | Destabilizing | 1.0 | D | 0.615 | neutral | D | 0.523071837 | None | None | N |
T/S | 0.3 | likely_benign | 0.2849 | benign | -0.687 | Destabilizing | 0.905 | D | 0.376 | neutral | D | 0.528880302 | None | None | N |
T/V | 0.3782 | ambiguous | 0.4429 | ambiguous | -0.187 | Destabilizing | 0.998 | D | 0.597 | neutral | None | None | None | None | N |
T/W | 0.8839 | likely_pathogenic | 0.8931 | pathogenic | -0.67 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
T/Y | 0.7705 | likely_pathogenic | 0.7851 | pathogenic | -0.422 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.