Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6406 | 19441;19442;19443 | chr2:178728710;178728709;178728708 | chr2:179593437;179593436;179593435 |
N2AB | 6089 | 18490;18491;18492 | chr2:178728710;178728709;178728708 | chr2:179593437;179593436;179593435 |
N2A | 5162 | 15709;15710;15711 | chr2:178728710;178728709;178728708 | chr2:179593437;179593436;179593435 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | None | None | 1.0 | D | 0.943 | 0.58 | 0.807043397782 | gnomAD-4.0.0 | 1.59331E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77608E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.8422 | likely_pathogenic | 0.8466 | pathogenic | -1.641 | Destabilizing | 0.998 | D | 0.723 | prob.delet. | None | None | None | None | N |
C/D | 0.9977 | likely_pathogenic | 0.998 | pathogenic | -1.517 | Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
C/E | 0.9987 | likely_pathogenic | 0.9988 | pathogenic | -1.266 | Destabilizing | 1.0 | D | 0.941 | deleterious | None | None | None | None | N |
C/F | 0.5972 | likely_pathogenic | 0.5586 | ambiguous | -0.996 | Destabilizing | 1.0 | D | 0.931 | deleterious | D | 0.558787231 | None | None | N |
C/G | 0.6897 | likely_pathogenic | 0.6718 | pathogenic | -2.023 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | D | 0.540682976 | None | None | N |
C/H | 0.9909 | likely_pathogenic | 0.9904 | pathogenic | -2.249 | Highly Destabilizing | 1.0 | D | 0.937 | deleterious | None | None | None | None | N |
C/I | 0.8603 | likely_pathogenic | 0.8279 | pathogenic | -0.6 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
C/K | 0.9991 | likely_pathogenic | 0.9991 | pathogenic | -1.055 | Destabilizing | 1.0 | D | 0.919 | deleterious | None | None | None | None | N |
C/L | 0.8626 | likely_pathogenic | 0.8469 | pathogenic | -0.6 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
C/M | 0.902 | likely_pathogenic | 0.8926 | pathogenic | 0.288 | Stabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
C/N | 0.9853 | likely_pathogenic | 0.9858 | pathogenic | -1.737 | Destabilizing | 1.0 | D | 0.939 | deleterious | None | None | None | None | N |
C/P | 0.999 | likely_pathogenic | 0.9992 | pathogenic | -0.924 | Destabilizing | 1.0 | D | 0.939 | deleterious | None | None | None | None | N |
C/Q | 0.997 | likely_pathogenic | 0.9971 | pathogenic | -1.224 | Destabilizing | 1.0 | D | 0.951 | deleterious | None | None | None | None | N |
C/R | 0.9925 | likely_pathogenic | 0.9927 | pathogenic | -1.525 | Destabilizing | 1.0 | D | 0.944 | deleterious | D | 0.55904072 | None | None | N |
C/S | 0.9126 | likely_pathogenic | 0.9082 | pathogenic | -2.034 | Highly Destabilizing | 1.0 | D | 0.837 | deleterious | D | 0.52932667 | None | None | N |
C/T | 0.9224 | likely_pathogenic | 0.9171 | pathogenic | -1.585 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
C/V | 0.7066 | likely_pathogenic | 0.6742 | pathogenic | -0.924 | Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | N |
C/W | 0.957 | likely_pathogenic | 0.9559 | pathogenic | -1.398 | Destabilizing | 1.0 | D | 0.924 | deleterious | D | 0.55904072 | None | None | N |
C/Y | 0.7792 | likely_pathogenic | 0.7697 | pathogenic | -1.193 | Destabilizing | 1.0 | D | 0.943 | deleterious | D | 0.52455373 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.