Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6415 | 19468;19469;19470 | chr2:178728683;178728682;178728681 | chr2:179593410;179593409;179593408 |
N2AB | 6098 | 18517;18518;18519 | chr2:178728683;178728682;178728681 | chr2:179593410;179593409;179593408 |
N2A | 5171 | 15736;15737;15738 | chr2:178728683;178728682;178728681 | chr2:179593410;179593409;179593408 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1236523365 | 0.447 | 0.042 | N | 0.383 | 0.15 | 0.223847106136 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/E | rs1236523365 | 0.447 | 0.042 | N | 0.383 | 0.15 | 0.223847106136 | gnomAD-4.0.0 | 1.59233E-06 | None | None | None | None | N | None | 0 | 2.28948E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/N | None | None | 0.175 | N | 0.373 | 0.181 | 0.227260227426 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
K/R | rs775494513 | -0.01 | None | N | 0.13 | 0.111 | 0.21279746466 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
K/R | rs775494513 | -0.01 | None | N | 0.13 | 0.111 | 0.21279746466 | gnomAD-4.0.0 | 2.73757E-06 | None | None | None | None | N | None | 0 | 2.23884E-05 | None | 0 | 0 | None | 0 | 0 | 2.69883E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3321 | likely_benign | 0.3335 | benign | -0.196 | Destabilizing | 0.055 | N | 0.391 | neutral | None | None | None | None | N |
K/C | 0.684 | likely_pathogenic | 0.7057 | pathogenic | -0.316 | Destabilizing | 0.958 | D | 0.467 | neutral | None | None | None | None | N |
K/D | 0.5833 | likely_pathogenic | 0.5439 | ambiguous | 0.05 | Stabilizing | 0.22 | N | 0.474 | neutral | None | None | None | None | N |
K/E | 0.1949 | likely_benign | 0.188 | benign | 0.121 | Stabilizing | 0.042 | N | 0.383 | neutral | N | 0.501368413 | None | None | N |
K/F | 0.7559 | likely_pathogenic | 0.7583 | pathogenic | 0.017 | Stabilizing | 0.497 | N | 0.489 | neutral | None | None | None | None | N |
K/G | 0.4924 | ambiguous | 0.4801 | ambiguous | -0.51 | Destabilizing | 0.22 | N | 0.49 | neutral | None | None | None | None | N |
K/H | 0.2143 | likely_benign | 0.2049 | benign | -0.788 | Destabilizing | 0.497 | N | 0.484 | neutral | None | None | None | None | N |
K/I | 0.3561 | ambiguous | 0.3684 | ambiguous | 0.587 | Stabilizing | 0.002 | N | 0.357 | neutral | N | 0.496874959 | None | None | N |
K/L | 0.3298 | likely_benign | 0.3416 | ambiguous | 0.587 | Stabilizing | 0.02 | N | 0.399 | neutral | None | None | None | None | N |
K/M | 0.2404 | likely_benign | 0.2571 | benign | 0.29 | Stabilizing | 0.497 | N | 0.483 | neutral | None | None | None | None | N |
K/N | 0.3279 | likely_benign | 0.3202 | benign | -0.091 | Destabilizing | 0.175 | N | 0.373 | neutral | N | 0.518975526 | None | None | N |
K/P | 0.8725 | likely_pathogenic | 0.8511 | pathogenic | 0.357 | Stabilizing | 0.667 | D | 0.537 | neutral | None | None | None | None | N |
K/Q | 0.1027 | likely_benign | 0.1002 | benign | -0.181 | Destabilizing | 0.003 | N | 0.149 | neutral | N | 0.473491166 | None | None | N |
K/R | 0.078 | likely_benign | 0.0748 | benign | -0.369 | Destabilizing | None | N | 0.13 | neutral | N | 0.521765115 | None | None | N |
K/S | 0.3579 | ambiguous | 0.3516 | ambiguous | -0.643 | Destabilizing | 0.055 | N | 0.366 | neutral | None | None | None | None | N |
K/T | 0.1514 | likely_benign | 0.1576 | benign | -0.389 | Destabilizing | 0.001 | N | 0.214 | neutral | N | 0.441610821 | None | None | N |
K/V | 0.3217 | likely_benign | 0.336 | benign | 0.357 | Stabilizing | 0.02 | N | 0.423 | neutral | None | None | None | None | N |
K/W | 0.6792 | likely_pathogenic | 0.6709 | pathogenic | 0.082 | Stabilizing | 0.958 | D | 0.482 | neutral | None | None | None | None | N |
K/Y | 0.5967 | likely_pathogenic | 0.6054 | pathogenic | 0.369 | Stabilizing | 0.667 | D | 0.487 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.