Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6416 | 19471;19472;19473 | chr2:178728680;178728679;178728678 | chr2:179593407;179593406;179593405 |
N2AB | 6099 | 18520;18521;18522 | chr2:178728680;178728679;178728678 | chr2:179593407;179593406;179593405 |
N2A | 5172 | 15739;15740;15741 | chr2:178728680;178728679;178728678 | chr2:179593407;179593406;179593405 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | rs1431823102 | -2.376 | 0.971 | D | 0.859 | 0.772 | 0.933126727598 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 1.18203E-03 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/G | rs1431823102 | -2.376 | 0.971 | D | 0.859 | 0.772 | 0.933126727598 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/G | rs1431823102 | -2.376 | 0.971 | D | 0.859 | 0.772 | 0.933126727598 | gnomAD-4.0.0 | 6.57333E-06 | None | None | None | None | N | None | 0 | 6.55136E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4936 | ambiguous | 0.4769 | ambiguous | -1.695 | Destabilizing | 0.698 | D | 0.665 | neutral | D | 0.550197668 | None | None | N |
V/C | 0.8914 | likely_pathogenic | 0.8887 | pathogenic | -0.983 | Destabilizing | 0.998 | D | 0.73 | prob.delet. | None | None | None | None | N |
V/D | 0.9362 | likely_pathogenic | 0.9242 | pathogenic | -2.15 | Highly Destabilizing | 0.993 | D | 0.864 | deleterious | None | None | None | None | N |
V/E | 0.8476 | likely_pathogenic | 0.8174 | pathogenic | -1.937 | Destabilizing | 0.971 | D | 0.857 | deleterious | D | 0.619670235 | None | None | N |
V/F | 0.4505 | ambiguous | 0.3783 | ambiguous | -1.048 | Destabilizing | 0.956 | D | 0.775 | deleterious | None | None | None | None | N |
V/G | 0.5759 | likely_pathogenic | 0.5686 | pathogenic | -2.167 | Highly Destabilizing | 0.971 | D | 0.859 | deleterious | D | 0.594132123 | None | None | N |
V/H | 0.9503 | likely_pathogenic | 0.9371 | pathogenic | -1.694 | Destabilizing | 0.998 | D | 0.84 | deleterious | None | None | None | None | N |
V/I | 0.108 | likely_benign | 0.0863 | benign | -0.385 | Destabilizing | 0.019 | N | 0.274 | neutral | None | None | None | None | N |
V/K | 0.8867 | likely_pathogenic | 0.8561 | pathogenic | -1.274 | Destabilizing | 0.956 | D | 0.857 | deleterious | None | None | None | None | N |
V/L | 0.4056 | ambiguous | 0.2882 | benign | -0.385 | Destabilizing | 0.247 | N | 0.48 | neutral | D | 0.537414304 | None | None | N |
V/M | 0.3507 | ambiguous | 0.26 | benign | -0.371 | Destabilizing | 0.247 | N | 0.527 | neutral | D | 0.577709154 | None | None | N |
V/N | 0.8685 | likely_pathogenic | 0.8352 | pathogenic | -1.603 | Destabilizing | 0.978 | D | 0.861 | deleterious | None | None | None | None | N |
V/P | 0.7348 | likely_pathogenic | 0.7517 | pathogenic | -0.797 | Destabilizing | 0.993 | D | 0.859 | deleterious | None | None | None | None | N |
V/Q | 0.8494 | likely_pathogenic | 0.8051 | pathogenic | -1.474 | Destabilizing | 0.978 | D | 0.852 | deleterious | None | None | None | None | N |
V/R | 0.8659 | likely_pathogenic | 0.8336 | pathogenic | -1.155 | Destabilizing | 0.956 | D | 0.855 | deleterious | None | None | None | None | N |
V/S | 0.7308 | likely_pathogenic | 0.7091 | pathogenic | -2.164 | Highly Destabilizing | 0.956 | D | 0.835 | deleterious | None | None | None | None | N |
V/T | 0.5501 | ambiguous | 0.5023 | ambiguous | -1.809 | Destabilizing | 0.86 | D | 0.71 | prob.delet. | None | None | None | None | N |
V/W | 0.9404 | likely_pathogenic | 0.9341 | pathogenic | -1.452 | Destabilizing | 0.998 | D | 0.841 | deleterious | None | None | None | None | N |
V/Y | 0.843 | likely_pathogenic | 0.822 | pathogenic | -1.026 | Destabilizing | 0.978 | D | 0.756 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.