Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6422 | 19489;19490;19491 | chr2:178728662;178728661;178728660 | chr2:179593389;179593388;179593387 |
N2AB | 6105 | 18538;18539;18540 | chr2:178728662;178728661;178728660 | chr2:179593389;179593388;179593387 |
N2A | 5178 | 15757;15758;15759 | chr2:178728662;178728661;178728660 | chr2:179593389;179593388;179593387 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs774524508 | -0.39 | 1.0 | D | 0.665 | 0.599 | 0.763780976484 | gnomAD-2.1.1 | 2.51E-05 | None | None | None | None | N | None | 4.14E-05 | 0 | None | 0 | 0 | None | 0 | None | 1.20212E-04 | 1.57E-05 | 1.41243E-04 |
G/R | rs774524508 | -0.39 | 1.0 | D | 0.665 | 0.599 | 0.763780976484 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
G/R | rs774524508 | -0.39 | 1.0 | D | 0.665 | 0.599 | 0.763780976484 | gnomAD-4.0.0 | 2.35562E-05 | None | None | None | None | N | None | 2.67115E-05 | 0 | None | 0 | 0 | None | 6.25547E-05 | 0 | 2.54332E-05 | 0 | 3.2039E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.42 | ambiguous | 0.4314 | ambiguous | -0.299 | Destabilizing | 0.996 | D | 0.509 | neutral | N | 0.507600067 | None | None | N |
G/C | 0.5679 | likely_pathogenic | 0.5614 | ambiguous | -0.927 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
G/D | 0.2281 | likely_benign | 0.2069 | benign | -0.717 | Destabilizing | 0.998 | D | 0.679 | prob.neutral | None | None | None | None | N |
G/E | 0.3052 | likely_benign | 0.2561 | benign | -0.886 | Destabilizing | 0.884 | D | 0.387 | neutral | N | 0.485822054 | None | None | N |
G/F | 0.898 | likely_pathogenic | 0.8974 | pathogenic | -1.055 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
G/H | 0.5566 | ambiguous | 0.5385 | ambiguous | -0.461 | Destabilizing | 0.844 | D | 0.429 | neutral | None | None | None | None | N |
G/I | 0.8271 | likely_pathogenic | 0.8227 | pathogenic | -0.508 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
G/K | 0.52 | ambiguous | 0.4366 | ambiguous | -0.856 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
G/L | 0.8512 | likely_pathogenic | 0.8527 | pathogenic | -0.508 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
G/M | 0.824 | likely_pathogenic | 0.8253 | pathogenic | -0.573 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
G/N | 0.2786 | likely_benign | 0.2824 | benign | -0.509 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
G/P | 0.9896 | likely_pathogenic | 0.9919 | pathogenic | -0.408 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
G/Q | 0.3722 | ambiguous | 0.3446 | ambiguous | -0.81 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
G/R | 0.3704 | ambiguous | 0.3213 | benign | -0.367 | Destabilizing | 1.0 | D | 0.665 | neutral | D | 0.543555087 | None | None | N |
G/S | 0.1449 | likely_benign | 0.1528 | benign | -0.623 | Destabilizing | 0.999 | D | 0.652 | neutral | None | None | None | None | N |
G/T | 0.4988 | ambiguous | 0.5028 | ambiguous | -0.729 | Destabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
G/V | 0.7431 | likely_pathogenic | 0.7371 | pathogenic | -0.408 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | D | 0.533466229 | None | None | N |
G/W | 0.7207 | likely_pathogenic | 0.7216 | pathogenic | -1.181 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | D | 0.544822535 | None | None | N |
G/Y | 0.7766 | likely_pathogenic | 0.761 | pathogenic | -0.858 | Destabilizing | 0.999 | D | 0.722 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.