Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6432 | 19519;19520;19521 | chr2:178728632;178728631;178728630 | chr2:179593359;179593358;179593357 |
N2AB | 6115 | 18568;18569;18570 | chr2:178728632;178728631;178728630 | chr2:179593359;179593358;179593357 |
N2A | 5188 | 15787;15788;15789 | chr2:178728632;178728631;178728630 | chr2:179593359;179593358;179593357 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 0.015 | N | 0.431 | 0.231 | 0.618519337204 | gnomAD-4.0.0 | 6.84443E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99627E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0891 | likely_benign | 0.0851 | benign | -0.998 | Destabilizing | None | N | 0.151 | neutral | N | 0.505795585 | None | None | N |
S/C | 0.1612 | likely_benign | 0.1425 | benign | -0.841 | Destabilizing | 0.883 | D | 0.511 | neutral | None | None | None | None | N |
S/D | 0.4125 | ambiguous | 0.3562 | ambiguous | -0.963 | Destabilizing | 0.22 | N | 0.39 | neutral | None | None | None | None | N |
S/E | 0.4848 | ambiguous | 0.4318 | ambiguous | -0.871 | Destabilizing | 0.22 | N | 0.373 | neutral | None | None | None | None | N |
S/F | 0.2067 | likely_benign | 0.1906 | benign | -1.161 | Destabilizing | 0.497 | N | 0.536 | neutral | None | None | None | None | N |
S/G | 0.104 | likely_benign | 0.0969 | benign | -1.304 | Destabilizing | 0.055 | N | 0.362 | neutral | None | None | None | None | N |
S/H | 0.2548 | likely_benign | 0.2435 | benign | -1.742 | Destabilizing | 0.859 | D | 0.521 | neutral | None | None | None | None | N |
S/I | 0.146 | likely_benign | 0.1407 | benign | -0.262 | Destabilizing | 0.124 | N | 0.485 | neutral | None | None | None | None | N |
S/K | 0.5222 | ambiguous | 0.4955 | ambiguous | -0.488 | Destabilizing | 0.002 | N | 0.119 | neutral | None | None | None | None | N |
S/L | 0.1053 | likely_benign | 0.0987 | benign | -0.262 | Destabilizing | 0.015 | N | 0.431 | neutral | N | 0.513953708 | None | None | N |
S/M | 0.1644 | likely_benign | 0.173 | benign | -0.083 | Destabilizing | 0.009 | N | 0.36 | neutral | None | None | None | None | N |
S/N | 0.1256 | likely_benign | 0.1168 | benign | -0.834 | Destabilizing | 0.22 | N | 0.399 | neutral | None | None | None | None | N |
S/P | 0.7246 | likely_pathogenic | 0.6483 | pathogenic | -0.474 | Destabilizing | 0.301 | N | 0.477 | neutral | N | 0.510510758 | None | None | N |
S/Q | 0.3773 | ambiguous | 0.3631 | ambiguous | -0.876 | Destabilizing | 0.22 | N | 0.471 | neutral | None | None | None | None | N |
S/R | 0.4157 | ambiguous | 0.3769 | ambiguous | -0.585 | Destabilizing | 0.124 | N | 0.445 | neutral | None | None | None | None | N |
S/T | 0.069 | likely_benign | 0.0704 | benign | -0.72 | Destabilizing | None | N | 0.128 | neutral | N | 0.452809249 | None | None | N |
S/V | 0.1545 | likely_benign | 0.1541 | benign | -0.474 | Destabilizing | 0.055 | N | 0.447 | neutral | None | None | None | None | N |
S/W | 0.3101 | likely_benign | 0.2913 | benign | -1.192 | Destabilizing | 0.958 | D | 0.597 | neutral | None | None | None | None | N |
S/Y | 0.1898 | likely_benign | 0.1669 | benign | -0.842 | Destabilizing | 0.667 | D | 0.549 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.