Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6439 | 19540;19541;19542 | chr2:178728611;178728610;178728609 | chr2:179593338;179593337;179593336 |
N2AB | 6122 | 18589;18590;18591 | chr2:178728611;178728610;178728609 | chr2:179593338;179593337;179593336 |
N2A | 5195 | 15808;15809;15810 | chr2:178728611;178728610;178728609 | chr2:179593338;179593337;179593336 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs727505289 | -0.501 | 0.953 | N | 0.582 | 0.254 | 0.444305618086 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.1212E-04 | None | 0 | None | 0 | 1.78E-05 | 0 |
V/M | rs727505289 | -0.501 | 0.953 | N | 0.582 | 0.254 | 0.444305618086 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/M | rs727505289 | -0.501 | 0.953 | N | 0.582 | 0.254 | 0.444305618086 | gnomAD-4.0.0 | 1.42585E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.45733E-04 | None | 0 | 0 | 8.47785E-06 | 1.0982E-05 | 1.60226E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3165 | likely_benign | 0.2437 | benign | -1.597 | Destabilizing | 0.296 | N | 0.531 | neutral | N | 0.489616349 | None | None | N |
V/C | 0.8691 | likely_pathogenic | 0.8066 | pathogenic | -1.264 | Destabilizing | 0.991 | D | 0.707 | prob.neutral | None | None | None | None | N |
V/D | 0.6906 | likely_pathogenic | 0.5266 | ambiguous | -1.588 | Destabilizing | 0.906 | D | 0.803 | deleterious | None | None | None | None | N |
V/E | 0.4467 | ambiguous | 0.3165 | benign | -1.563 | Destabilizing | 0.879 | D | 0.755 | deleterious | N | 0.480195373 | None | None | N |
V/F | 0.2539 | likely_benign | 0.1917 | benign | -1.274 | Destabilizing | 0.826 | D | 0.72 | prob.delet. | None | None | None | None | N |
V/G | 0.5639 | ambiguous | 0.4179 | ambiguous | -1.934 | Destabilizing | 0.879 | D | 0.767 | deleterious | N | 0.490630307 | None | None | N |
V/H | 0.6537 | likely_pathogenic | 0.5175 | ambiguous | -1.497 | Destabilizing | 0.991 | D | 0.772 | deleterious | None | None | None | None | N |
V/I | 0.0727 | likely_benign | 0.0699 | benign | -0.756 | Destabilizing | 0.002 | N | 0.204 | neutral | None | None | None | None | N |
V/K | 0.3281 | likely_benign | 0.2357 | benign | -1.218 | Destabilizing | 0.906 | D | 0.759 | deleterious | None | None | None | None | N |
V/L | 0.3016 | likely_benign | 0.2468 | benign | -0.756 | Destabilizing | 0.074 | N | 0.374 | neutral | N | 0.487959186 | None | None | N |
V/M | 0.173 | likely_benign | 0.1362 | benign | -0.677 | Destabilizing | 0.953 | D | 0.582 | neutral | N | 0.487769925 | None | None | N |
V/N | 0.4921 | ambiguous | 0.3625 | ambiguous | -1.115 | Destabilizing | 0.967 | D | 0.803 | deleterious | None | None | None | None | N |
V/P | 0.9876 | likely_pathogenic | 0.9777 | pathogenic | -1.003 | Destabilizing | 0.967 | D | 0.772 | deleterious | None | None | None | None | N |
V/Q | 0.3977 | ambiguous | 0.3058 | benign | -1.274 | Destabilizing | 0.967 | D | 0.766 | deleterious | None | None | None | None | N |
V/R | 0.2911 | likely_benign | 0.2168 | benign | -0.765 | Destabilizing | 0.906 | D | 0.799 | deleterious | None | None | None | None | N |
V/S | 0.4173 | ambiguous | 0.3141 | benign | -1.677 | Destabilizing | 0.906 | D | 0.684 | prob.neutral | None | None | None | None | N |
V/T | 0.2026 | likely_benign | 0.171 | benign | -1.539 | Destabilizing | 0.575 | D | 0.525 | neutral | None | None | None | None | N |
V/W | 0.8986 | likely_pathogenic | 0.8221 | pathogenic | -1.488 | Destabilizing | 0.991 | D | 0.741 | deleterious | None | None | None | None | N |
V/Y | 0.6746 | likely_pathogenic | 0.5654 | pathogenic | -1.164 | Destabilizing | 0.906 | D | 0.729 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.