Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6443 | 19552;19553;19554 | chr2:178728599;178728598;178728597 | chr2:179593326;179593325;179593324 |
N2AB | 6126 | 18601;18602;18603 | chr2:178728599;178728598;178728597 | chr2:179593326;179593325;179593324 |
N2A | 5199 | 15820;15821;15822 | chr2:178728599;178728598;178728597 | chr2:179593326;179593325;179593324 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | rs1217984218 | None | 0.92 | N | 0.559 | 0.463 | 0.38342384377 | gnomAD-4.0.0 | 6.84456E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99633E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5752 | likely_pathogenic | 0.5501 | ambiguous | -1.463 | Destabilizing | 0.863 | D | 0.549 | neutral | None | None | None | None | N |
R/C | 0.2457 | likely_benign | 0.2163 | benign | -1.484 | Destabilizing | 0.999 | D | 0.597 | neutral | None | None | None | None | N |
R/D | 0.8226 | likely_pathogenic | 0.7894 | pathogenic | -0.372 | Destabilizing | 0.969 | D | 0.572 | neutral | None | None | None | None | N |
R/E | 0.4918 | ambiguous | 0.4448 | ambiguous | -0.231 | Destabilizing | 0.863 | D | 0.621 | neutral | None | None | None | None | N |
R/F | 0.6514 | likely_pathogenic | 0.619 | pathogenic | -1.246 | Destabilizing | 0.997 | D | 0.6 | neutral | None | None | None | None | N |
R/G | 0.4544 | ambiguous | 0.4242 | ambiguous | -1.775 | Destabilizing | 0.959 | D | 0.553 | neutral | N | 0.517668804 | None | None | N |
R/H | 0.0999 | likely_benign | 0.0966 | benign | -1.787 | Destabilizing | 0.997 | D | 0.616 | neutral | None | None | None | None | N |
R/I | 0.3152 | likely_benign | 0.293 | benign | -0.602 | Destabilizing | 0.996 | D | 0.603 | neutral | N | 0.478128981 | None | None | N |
R/K | 0.119 | likely_benign | 0.1177 | benign | -1.303 | Destabilizing | 0.021 | N | 0.369 | neutral | N | 0.387875123 | None | None | N |
R/L | 0.3347 | likely_benign | 0.3121 | benign | -0.602 | Destabilizing | 0.969 | D | 0.553 | neutral | None | None | None | None | N |
R/M | 0.3615 | ambiguous | 0.3398 | benign | -0.876 | Destabilizing | 0.997 | D | 0.589 | neutral | None | None | None | None | N |
R/N | 0.6927 | likely_pathogenic | 0.6648 | pathogenic | -0.778 | Destabilizing | 0.969 | D | 0.578 | neutral | None | None | None | None | N |
R/P | 0.9658 | likely_pathogenic | 0.9584 | pathogenic | -0.872 | Destabilizing | 0.997 | D | 0.581 | neutral | None | None | None | None | N |
R/Q | 0.1063 | likely_benign | 0.0995 | benign | -0.983 | Destabilizing | 0.939 | D | 0.61 | neutral | None | None | None | None | N |
R/S | 0.5614 | ambiguous | 0.5325 | ambiguous | -1.751 | Destabilizing | 0.92 | D | 0.559 | neutral | N | 0.506027658 | None | None | N |
R/T | 0.2878 | likely_benign | 0.2685 | benign | -1.419 | Destabilizing | 0.959 | D | 0.532 | neutral | N | 0.456846845 | None | None | N |
R/V | 0.4275 | ambiguous | 0.4108 | ambiguous | -0.872 | Destabilizing | 0.991 | D | 0.585 | neutral | None | None | None | None | N |
R/W | 0.2175 | likely_benign | 0.1997 | benign | -0.749 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | N |
R/Y | 0.4859 | ambiguous | 0.4408 | ambiguous | -0.5 | Destabilizing | 0.997 | D | 0.59 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.