Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6444 | 19555;19556;19557 | chr2:178728596;178728595;178728594 | chr2:179593323;179593322;179593321 |
N2AB | 6127 | 18604;18605;18606 | chr2:178728596;178728595;178728594 | chr2:179593323;179593322;179593321 |
N2A | 5200 | 15823;15824;15825 | chr2:178728596;178728595;178728594 | chr2:179593323;179593322;179593321 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.968 | D | 0.697 | 0.763 | 0.672494282746 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9485 | likely_pathogenic | 0.9403 | pathogenic | -2.61 | Highly Destabilizing | 0.959 | D | 0.704 | prob.neutral | None | None | None | None | N |
I/C | 0.9405 | likely_pathogenic | 0.9335 | pathogenic | -1.622 | Destabilizing | 0.999 | D | 0.821 | deleterious | None | None | None | None | N |
I/D | 0.9951 | likely_pathogenic | 0.9939 | pathogenic | -3.199 | Highly Destabilizing | 0.996 | D | 0.908 | deleterious | None | None | None | None | N |
I/E | 0.9868 | likely_pathogenic | 0.9839 | pathogenic | -2.892 | Highly Destabilizing | 0.996 | D | 0.905 | deleterious | None | None | None | None | N |
I/F | 0.2913 | likely_benign | 0.2854 | benign | -1.452 | Destabilizing | 0.059 | N | 0.351 | neutral | D | 0.540682456 | None | None | N |
I/G | 0.9859 | likely_pathogenic | 0.9838 | pathogenic | -3.173 | Highly Destabilizing | 0.988 | D | 0.887 | deleterious | None | None | None | None | N |
I/H | 0.9531 | likely_pathogenic | 0.9505 | pathogenic | -2.923 | Highly Destabilizing | 0.999 | D | 0.899 | deleterious | None | None | None | None | N |
I/K | 0.946 | likely_pathogenic | 0.9437 | pathogenic | -1.759 | Destabilizing | 0.996 | D | 0.903 | deleterious | None | None | None | None | N |
I/L | 0.18 | likely_benign | 0.2184 | benign | -0.906 | Destabilizing | 0.011 | N | 0.27 | neutral | D | 0.568877105 | None | None | N |
I/M | 0.2138 | likely_benign | 0.2238 | benign | -1.146 | Destabilizing | 0.968 | D | 0.697 | prob.neutral | D | 0.582764979 | None | None | N |
I/N | 0.9266 | likely_pathogenic | 0.9107 | pathogenic | -2.417 | Highly Destabilizing | 0.995 | D | 0.901 | deleterious | D | 0.648487217 | None | None | N |
I/P | 0.9906 | likely_pathogenic | 0.991 | pathogenic | -1.467 | Destabilizing | 0.996 | D | 0.908 | deleterious | None | None | None | None | N |
I/Q | 0.9566 | likely_pathogenic | 0.9528 | pathogenic | -2.069 | Highly Destabilizing | 0.996 | D | 0.915 | deleterious | None | None | None | None | N |
I/R | 0.9267 | likely_pathogenic | 0.9245 | pathogenic | -1.878 | Destabilizing | 0.996 | D | 0.905 | deleterious | None | None | None | None | N |
I/S | 0.9421 | likely_pathogenic | 0.9284 | pathogenic | -2.891 | Highly Destabilizing | 0.984 | D | 0.839 | deleterious | D | 0.648487217 | None | None | N |
I/T | 0.9657 | likely_pathogenic | 0.9591 | pathogenic | -2.437 | Highly Destabilizing | 0.946 | D | 0.789 | deleterious | D | 0.594685739 | None | None | N |
I/V | 0.2443 | likely_benign | 0.2197 | benign | -1.467 | Destabilizing | 0.437 | N | 0.437 | neutral | D | 0.558721655 | None | None | N |
I/W | 0.9264 | likely_pathogenic | 0.929 | pathogenic | -1.855 | Destabilizing | 0.999 | D | 0.893 | deleterious | None | None | None | None | N |
I/Y | 0.7896 | likely_pathogenic | 0.7967 | pathogenic | -1.68 | Destabilizing | 0.952 | D | 0.797 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.