Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6447 | 19564;19565;19566 | chr2:178728587;178728586;178728585 | chr2:179593314;179593313;179593312 |
N2AB | 6130 | 18613;18614;18615 | chr2:178728587;178728586;178728585 | chr2:179593314;179593313;179593312 |
N2A | 5203 | 15832;15833;15834 | chr2:178728587;178728586;178728585 | chr2:179593314;179593313;179593312 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1270776568 | None | 0.116 | N | 0.162 | 0.22 | 0.52127940124 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/A | rs1270776568 | None | 0.116 | N | 0.162 | 0.22 | 0.52127940124 | gnomAD-4.0.0 | 1.31482E-05 | None | None | None | None | N | None | 4.82789E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2677 | likely_benign | 0.2615 | benign | -2.352 | Highly Destabilizing | 0.116 | N | 0.162 | neutral | N | 0.438591945 | None | None | N |
V/C | 0.893 | likely_pathogenic | 0.9104 | pathogenic | -2.047 | Highly Destabilizing | 1.0 | D | 0.557 | neutral | None | None | None | None | N |
V/D | 0.9741 | likely_pathogenic | 0.9755 | pathogenic | -3.298 | Highly Destabilizing | 0.995 | D | 0.627 | neutral | None | None | None | None | N |
V/E | 0.9523 | likely_pathogenic | 0.953 | pathogenic | -3.086 | Highly Destabilizing | 0.979 | D | 0.559 | neutral | D | 0.550981276 | None | None | N |
V/F | 0.7502 | likely_pathogenic | 0.7884 | pathogenic | -1.315 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | N |
V/G | 0.6167 | likely_pathogenic | 0.6257 | pathogenic | -2.856 | Highly Destabilizing | 0.959 | D | 0.537 | neutral | N | 0.51888737 | None | None | N |
V/H | 0.9882 | likely_pathogenic | 0.99 | pathogenic | -2.522 | Highly Destabilizing | 1.0 | D | 0.593 | neutral | None | None | None | None | N |
V/I | 0.1218 | likely_benign | 0.1321 | benign | -0.927 | Destabilizing | 0.906 | D | 0.517 | neutral | D | 0.533195617 | None | None | N |
V/K | 0.9713 | likely_pathogenic | 0.974 | pathogenic | -1.912 | Destabilizing | 0.984 | D | 0.582 | neutral | None | None | None | None | N |
V/L | 0.4858 | ambiguous | 0.5209 | ambiguous | -0.927 | Destabilizing | 0.906 | D | 0.469 | neutral | D | 0.532659686 | None | None | N |
V/M | 0.4355 | ambiguous | 0.466 | ambiguous | -1.132 | Destabilizing | 0.999 | D | 0.547 | neutral | None | None | None | None | N |
V/N | 0.9115 | likely_pathogenic | 0.919 | pathogenic | -2.304 | Highly Destabilizing | 0.995 | D | 0.625 | neutral | None | None | None | None | N |
V/P | 0.8836 | likely_pathogenic | 0.9009 | pathogenic | -1.38 | Destabilizing | 0.995 | D | 0.587 | neutral | None | None | None | None | N |
V/Q | 0.9531 | likely_pathogenic | 0.9554 | pathogenic | -2.153 | Highly Destabilizing | 0.999 | D | 0.609 | neutral | None | None | None | None | N |
V/R | 0.9508 | likely_pathogenic | 0.9543 | pathogenic | -1.696 | Destabilizing | 0.995 | D | 0.634 | neutral | None | None | None | None | N |
V/S | 0.6094 | likely_pathogenic | 0.6256 | pathogenic | -2.844 | Highly Destabilizing | 0.939 | D | 0.479 | neutral | None | None | None | None | N |
V/T | 0.3942 | ambiguous | 0.3982 | ambiguous | -2.506 | Highly Destabilizing | 0.293 | N | 0.246 | neutral | None | None | None | None | N |
V/W | 0.9945 | likely_pathogenic | 0.9962 | pathogenic | -1.861 | Destabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | N |
V/Y | 0.9805 | likely_pathogenic | 0.9844 | pathogenic | -1.571 | Destabilizing | 0.999 | D | 0.604 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.