Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6456 | 19591;19592;19593 | chr2:178728560;178728559;178728558 | chr2:179593287;179593286;179593285 |
N2AB | 6139 | 18640;18641;18642 | chr2:178728560;178728559;178728558 | chr2:179593287;179593286;179593285 |
N2A | 5212 | 15859;15860;15861 | chr2:178728560;178728559;178728558 | chr2:179593287;179593286;179593285 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 0.642 | N | 0.539 | 0.322 | 0.372087925617 | gnomAD-4.0.0 | 6.84534E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99713E-07 | 0 | 0 |
T/S | None | None | 0.01 | N | 0.211 | 0.075 | 0.202949470691 | gnomAD-4.0.0 | 2.0536E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69914E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0951 | likely_benign | 0.0889 | benign | -1.321 | Destabilizing | 0.139 | N | 0.357 | neutral | N | 0.504274569 | None | None | N |
T/C | 0.4518 | ambiguous | 0.4349 | ambiguous | -1.125 | Destabilizing | 0.981 | D | 0.676 | prob.neutral | None | None | None | None | N |
T/D | 0.6116 | likely_pathogenic | 0.5603 | ambiguous | -1.765 | Destabilizing | 0.704 | D | 0.666 | neutral | None | None | None | None | N |
T/E | 0.404 | ambiguous | 0.3791 | ambiguous | -1.569 | Destabilizing | 0.704 | D | 0.647 | neutral | None | None | None | None | N |
T/F | 0.3475 | ambiguous | 0.3158 | benign | -1.068 | Destabilizing | 0.543 | D | 0.683 | prob.neutral | None | None | None | None | N |
T/G | 0.3946 | ambiguous | 0.3722 | ambiguous | -1.714 | Destabilizing | 0.329 | N | 0.629 | neutral | None | None | None | None | N |
T/H | 0.295 | likely_benign | 0.2653 | benign | -1.797 | Destabilizing | 0.944 | D | 0.673 | neutral | None | None | None | None | N |
T/I | 0.1578 | likely_benign | 0.1673 | benign | -0.293 | Destabilizing | 0.01 | N | 0.413 | neutral | N | 0.506736082 | None | None | N |
T/K | 0.2714 | likely_benign | 0.2369 | benign | -0.607 | Destabilizing | 0.704 | D | 0.641 | neutral | None | None | None | None | N |
T/L | 0.1482 | likely_benign | 0.1411 | benign | -0.293 | Destabilizing | 0.031 | N | 0.559 | neutral | None | None | None | None | N |
T/M | 0.1136 | likely_benign | 0.1084 | benign | -0.321 | Destabilizing | 0.085 | N | 0.559 | neutral | None | None | None | None | N |
T/N | 0.1888 | likely_benign | 0.1749 | benign | -1.313 | Destabilizing | 0.642 | D | 0.539 | neutral | N | 0.493767637 | None | None | N |
T/P | 0.8573 | likely_pathogenic | 0.8268 | pathogenic | -0.606 | Destabilizing | 0.784 | D | 0.698 | prob.neutral | N | 0.516898322 | None | None | N |
T/Q | 0.2697 | likely_benign | 0.2432 | benign | -1.149 | Destabilizing | 0.828 | D | 0.719 | prob.delet. | None | None | None | None | N |
T/R | 0.1934 | likely_benign | 0.1622 | benign | -0.757 | Destabilizing | 0.704 | D | 0.699 | prob.neutral | None | None | None | None | N |
T/S | 0.1224 | likely_benign | 0.1155 | benign | -1.528 | Destabilizing | 0.01 | N | 0.211 | neutral | N | 0.448669213 | None | None | N |
T/V | 0.1335 | likely_benign | 0.1454 | benign | -0.606 | Destabilizing | 0.004 | N | 0.131 | neutral | None | None | None | None | N |
T/W | 0.738 | likely_pathogenic | 0.7015 | pathogenic | -1.189 | Destabilizing | 0.995 | D | 0.685 | prob.neutral | None | None | None | None | N |
T/Y | 0.3997 | ambiguous | 0.3525 | ambiguous | -0.811 | Destabilizing | 0.031 | N | 0.54 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.