Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6458 | 19597;19598;19599 | chr2:178728554;178728553;178728552 | chr2:179593281;179593280;179593279 |
N2AB | 6141 | 18646;18647;18648 | chr2:178728554;178728553;178728552 | chr2:179593281;179593280;179593279 |
N2A | 5214 | 15865;15866;15867 | chr2:178728554;178728553;178728552 | chr2:179593281;179593280;179593279 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.961 | N | 0.553 | 0.265 | 0.380564188046 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4044 | ambiguous | 0.3587 | ambiguous | -1.031 | Destabilizing | 0.97 | D | 0.629 | neutral | None | None | None | None | N |
K/C | 0.6677 | likely_pathogenic | 0.6635 | pathogenic | -1.157 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
K/D | 0.7703 | likely_pathogenic | 0.6899 | pathogenic | -0.284 | Destabilizing | 0.942 | D | 0.629 | neutral | None | None | None | None | N |
K/E | 0.1785 | likely_benign | 0.1332 | benign | -0.107 | Destabilizing | 0.044 | N | 0.355 | neutral | N | 0.383757383 | None | None | N |
K/F | 0.7689 | likely_pathogenic | 0.7128 | pathogenic | -0.574 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
K/G | 0.7367 | likely_pathogenic | 0.6918 | pathogenic | -1.437 | Destabilizing | 0.985 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/H | 0.2804 | likely_benign | 0.2593 | benign | -1.581 | Destabilizing | 0.999 | D | 0.71 | prob.delet. | None | None | None | None | N |
K/I | 0.2323 | likely_benign | 0.1899 | benign | 0.055 | Stabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
K/L | 0.3021 | likely_benign | 0.261 | benign | 0.055 | Stabilizing | 0.985 | D | 0.743 | deleterious | None | None | None | None | N |
K/M | 0.1683 | likely_benign | 0.1471 | benign | -0.179 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.487847329 | None | None | N |
K/N | 0.5596 | ambiguous | 0.4689 | ambiguous | -0.768 | Destabilizing | 0.98 | D | 0.563 | neutral | N | 0.499101686 | None | None | N |
K/P | 0.985 | likely_pathogenic | 0.9794 | pathogenic | -0.28 | Destabilizing | 0.999 | D | 0.696 | prob.neutral | None | None | None | None | N |
K/Q | 0.1087 | likely_benign | 0.098 | benign | -0.77 | Destabilizing | 0.961 | D | 0.578 | neutral | N | 0.446728639 | None | None | N |
K/R | 0.0855 | likely_benign | 0.085 | benign | -0.614 | Destabilizing | 0.961 | D | 0.553 | neutral | N | 0.470490933 | None | None | N |
K/S | 0.454 | ambiguous | 0.3966 | ambiguous | -1.569 | Destabilizing | 0.97 | D | 0.549 | neutral | None | None | None | None | N |
K/T | 0.1395 | likely_benign | 0.1132 | benign | -1.157 | Destabilizing | 0.98 | D | 0.663 | neutral | N | 0.468624064 | None | None | N |
K/V | 0.2184 | likely_benign | 0.1877 | benign | -0.28 | Destabilizing | 0.996 | D | 0.754 | deleterious | None | None | None | None | N |
K/W | 0.7585 | likely_pathogenic | 0.733 | pathogenic | -0.375 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
K/Y | 0.6548 | likely_pathogenic | 0.6046 | pathogenic | -0.072 | Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.