Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6471 | 19636;19637;19638 | chr2:178728515;178728514;178728513 | chr2:179593242;179593241;179593240 |
N2AB | 6154 | 18685;18686;18687 | chr2:178728515;178728514;178728513 | chr2:179593242;179593241;179593240 |
N2A | 5227 | 15904;15905;15906 | chr2:178728515;178728514;178728513 | chr2:179593242;179593241;179593240 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 0.873 | N | 0.519 | 0.282 | 0.637405007395 | gnomAD-4.0.0 | 2.05747E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.70393E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.234 | likely_benign | 0.2348 | benign | -1.256 | Destabilizing | 0.036 | N | 0.291 | neutral | None | None | None | None | N |
Y/C | 0.1124 | likely_benign | 0.1145 | benign | -0.112 | Destabilizing | 0.873 | D | 0.519 | neutral | N | 0.463620889 | None | None | N |
Y/D | 0.1348 | likely_benign | 0.1187 | benign | 0.685 | Stabilizing | 0.391 | N | 0.511 | neutral | N | 0.429622958 | None | None | N |
Y/E | 0.3252 | likely_benign | 0.3064 | benign | 0.695 | Stabilizing | 0.148 | N | 0.385 | neutral | None | None | None | None | N |
Y/F | 0.0726 | likely_benign | 0.0814 | benign | -0.617 | Destabilizing | None | N | 0.115 | neutral | N | 0.42404378 | None | None | N |
Y/G | 0.3177 | likely_benign | 0.309 | benign | -1.493 | Destabilizing | 0.26 | N | 0.418 | neutral | None | None | None | None | N |
Y/H | 0.1041 | likely_benign | 0.1071 | benign | -0.189 | Destabilizing | 0.873 | D | 0.457 | neutral | N | 0.444515053 | None | None | N |
Y/I | 0.2013 | likely_benign | 0.1997 | benign | -0.617 | Destabilizing | 0.001 | N | 0.145 | neutral | None | None | None | None | N |
Y/K | 0.3417 | ambiguous | 0.31 | benign | -0.106 | Destabilizing | 0.001 | N | 0.217 | neutral | None | None | None | None | N |
Y/L | 0.2497 | likely_benign | 0.2613 | benign | -0.617 | Destabilizing | 0.016 | N | 0.231 | neutral | None | None | None | None | N |
Y/M | 0.3586 | ambiguous | 0.3804 | ambiguous | -0.315 | Destabilizing | 0.596 | D | 0.52 | neutral | None | None | None | None | N |
Y/N | 0.0937 | likely_benign | 0.0863 | benign | -0.234 | Destabilizing | 0.391 | N | 0.491 | neutral | N | 0.427852089 | None | None | N |
Y/P | 0.6124 | likely_pathogenic | 0.5647 | pathogenic | -0.813 | Destabilizing | 0.722 | D | 0.552 | neutral | None | None | None | None | N |
Y/Q | 0.2491 | likely_benign | 0.2463 | benign | -0.22 | Destabilizing | 0.296 | N | 0.485 | neutral | None | None | None | None | N |
Y/R | 0.2358 | likely_benign | 0.2191 | benign | 0.255 | Stabilizing | 0.001 | N | 0.22 | neutral | None | None | None | None | N |
Y/S | 0.0883 | likely_benign | 0.0843 | benign | -0.785 | Destabilizing | 0.061 | N | 0.347 | neutral | N | 0.339827673 | None | None | N |
Y/T | 0.167 | likely_benign | 0.1656 | benign | -0.684 | Destabilizing | 0.001 | N | 0.212 | neutral | None | None | None | None | N |
Y/V | 0.1505 | likely_benign | 0.1531 | benign | -0.813 | Destabilizing | 0.001 | N | 0.153 | neutral | None | None | None | None | N |
Y/W | 0.3039 | likely_benign | 0.331 | benign | -0.533 | Destabilizing | 0.901 | D | 0.486 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.