Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6485 | 19678;19679;19680 | chr2:178728371;178728370;178728369 | chr2:179593098;179593097;179593096 |
N2AB | 6168 | 18727;18728;18729 | chr2:178728371;178728370;178728369 | chr2:179593098;179593097;179593096 |
N2A | 5241 | 15946;15947;15948 | chr2:178728371;178728370;178728369 | chr2:179593098;179593097;179593096 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.996 | N | 0.512 | 0.181 | 0.290222751274 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5308 | ambiguous | 0.5949 | pathogenic | -0.414 | Destabilizing | 0.997 | D | 0.576 | neutral | None | None | None | None | N |
K/C | 0.8622 | likely_pathogenic | 0.9068 | pathogenic | -0.406 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
K/D | 0.7325 | likely_pathogenic | 0.8119 | pathogenic | 0.052 | Stabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | N |
K/E | 0.2153 | likely_benign | 0.241 | benign | 0.145 | Stabilizing | 0.992 | D | 0.498 | neutral | D | 0.52376527 | None | None | N |
K/F | 0.9114 | likely_pathogenic | 0.9342 | pathogenic | -0.119 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
K/G | 0.5697 | likely_pathogenic | 0.6434 | pathogenic | -0.758 | Destabilizing | 1.0 | D | 0.585 | neutral | None | None | None | None | N |
K/H | 0.4485 | ambiguous | 0.5205 | ambiguous | -1.039 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
K/I | 0.615 | likely_pathogenic | 0.6507 | pathogenic | 0.466 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.497898462 | None | None | N |
K/L | 0.6308 | likely_pathogenic | 0.6593 | pathogenic | 0.466 | Stabilizing | 1.0 | D | 0.585 | neutral | None | None | None | None | N |
K/M | 0.4403 | ambiguous | 0.4531 | ambiguous | 0.264 | Stabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
K/N | 0.6105 | likely_pathogenic | 0.6983 | pathogenic | -0.281 | Destabilizing | 0.999 | D | 0.663 | neutral | N | 0.502444366 | None | None | N |
K/P | 0.9399 | likely_pathogenic | 0.9555 | pathogenic | 0.203 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/Q | 0.1521 | likely_benign | 0.1701 | benign | -0.346 | Destabilizing | 0.957 | D | 0.255 | neutral | N | 0.475816608 | None | None | N |
K/R | 0.0841 | likely_benign | 0.0872 | benign | -0.49 | Destabilizing | 0.996 | D | 0.512 | neutral | N | 0.440360027 | None | None | N |
K/S | 0.5478 | ambiguous | 0.6338 | pathogenic | -0.901 | Destabilizing | 0.997 | D | 0.573 | neutral | None | None | None | None | N |
K/T | 0.315 | likely_benign | 0.3527 | ambiguous | -0.611 | Destabilizing | 0.999 | D | 0.668 | neutral | N | 0.493442363 | None | None | N |
K/V | 0.515 | ambiguous | 0.5472 | ambiguous | 0.203 | Stabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
K/W | 0.855 | likely_pathogenic | 0.8781 | pathogenic | -0.021 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
K/Y | 0.8019 | likely_pathogenic | 0.8453 | pathogenic | 0.255 | Stabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.