Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6492 | 19699;19700;19701 | chr2:178728350;178728349;178728348 | chr2:179593077;179593076;179593075 |
N2AB | 6175 | 18748;18749;18750 | chr2:178728350;178728349;178728348 | chr2:179593077;179593076;179593075 |
N2A | 5248 | 15967;15968;15969 | chr2:178728350;178728349;178728348 | chr2:179593077;179593076;179593075 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs781106189 | -0.366 | 0.012 | N | 0.095 | 0.219 | 0.247872288689 | gnomAD-2.1.1 | 1.26E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.04471E-04 | None | 0 | 0 | 0 |
K/E | rs781106189 | -0.366 | 0.012 | N | 0.095 | 0.219 | 0.247872288689 | gnomAD-4.0.0 | 1.03148E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.70469E-06 | 1.18092E-04 | 3.33233E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1933 | likely_benign | 0.2185 | benign | -0.771 | Destabilizing | 0.373 | N | 0.363 | neutral | None | None | None | None | N |
K/C | 0.5649 | likely_pathogenic | 0.6585 | pathogenic | -0.843 | Destabilizing | 0.996 | D | 0.505 | neutral | None | None | None | None | N |
K/D | 0.447 | ambiguous | 0.5032 | ambiguous | -0.061 | Destabilizing | 0.59 | D | 0.365 | neutral | None | None | None | None | N |
K/E | 0.1179 | likely_benign | 0.1262 | benign | 0.105 | Stabilizing | 0.012 | N | 0.095 | neutral | N | 0.455270764 | None | None | N |
K/F | 0.7078 | likely_pathogenic | 0.7801 | pathogenic | -0.348 | Destabilizing | 0.953 | D | 0.535 | neutral | None | None | None | None | N |
K/G | 0.3144 | likely_benign | 0.379 | ambiguous | -1.177 | Destabilizing | 0.742 | D | 0.427 | neutral | None | None | None | None | N |
K/H | 0.2679 | likely_benign | 0.3114 | benign | -1.374 | Destabilizing | 0.984 | D | 0.445 | neutral | None | None | None | None | N |
K/I | 0.2751 | likely_benign | 0.3203 | benign | 0.302 | Stabilizing | 0.028 | N | 0.305 | neutral | N | 0.428177376 | None | None | N |
K/L | 0.3006 | likely_benign | 0.3535 | ambiguous | 0.302 | Stabilizing | 0.373 | N | 0.349 | neutral | None | None | None | None | N |
K/M | 0.1649 | likely_benign | 0.1852 | benign | 0.054 | Stabilizing | 0.953 | D | 0.446 | neutral | None | None | None | None | N |
K/N | 0.2972 | likely_benign | 0.3624 | ambiguous | -0.657 | Destabilizing | 0.684 | D | 0.429 | neutral | N | 0.484630879 | None | None | N |
K/P | 0.7893 | likely_pathogenic | 0.8201 | pathogenic | -0.026 | Destabilizing | 0.953 | D | 0.467 | neutral | None | None | None | None | N |
K/Q | 0.1108 | likely_benign | 0.118 | benign | -0.593 | Destabilizing | 0.684 | D | 0.469 | neutral | N | 0.442610898 | None | None | N |
K/R | 0.0847 | likely_benign | 0.092 | benign | -0.624 | Destabilizing | 0.684 | D | 0.408 | neutral | N | 0.444053693 | None | None | N |
K/S | 0.2547 | likely_benign | 0.3111 | benign | -1.389 | Destabilizing | 0.373 | N | 0.379 | neutral | None | None | None | None | N |
K/T | 0.1035 | likely_benign | 0.115 | benign | -0.984 | Destabilizing | 0.003 | N | 0.133 | neutral | N | 0.427564088 | None | None | N |
K/V | 0.229 | likely_benign | 0.2584 | benign | -0.026 | Destabilizing | 0.373 | N | 0.349 | neutral | None | None | None | None | N |
K/W | 0.7518 | likely_pathogenic | 0.8035 | pathogenic | -0.211 | Destabilizing | 0.996 | D | 0.547 | neutral | None | None | None | None | N |
K/Y | 0.523 | ambiguous | 0.5938 | pathogenic | 0.079 | Stabilizing | 0.984 | D | 0.495 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.