Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6502 | 19729;19730;19731 | chr2:178728320;178728319;178728318 | chr2:179593047;179593046;179593045 |
N2AB | 6185 | 18778;18779;18780 | chr2:178728320;178728319;178728318 | chr2:179593047;179593046;179593045 |
N2A | 5258 | 15997;15998;15999 | chr2:178728320;178728319;178728318 | chr2:179593047;179593046;179593045 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | None | None | 1.0 | D | 0.923 | 0.624 | 0.81509260357 | gnomAD-4.0.0 | 1.59346E-06 | None | None | disulfide | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41663E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.8315 | likely_pathogenic | 0.8819 | pathogenic | -1.712 | Destabilizing | 0.998 | D | 0.718 | prob.delet. | None | None | disulfide | None | N |
C/D | 0.9947 | likely_pathogenic | 0.9971 | pathogenic | -1.533 | Destabilizing | 1.0 | D | 0.906 | deleterious | None | None | disulfide | None | N |
C/E | 0.9967 | likely_pathogenic | 0.9981 | pathogenic | -1.304 | Destabilizing | 1.0 | D | 0.92 | deleterious | None | None | disulfide | None | N |
C/F | 0.6799 | likely_pathogenic | 0.7139 | pathogenic | -1.128 | Destabilizing | 1.0 | D | 0.911 | deleterious | D | 0.559610151 | disulfide | None | N |
C/G | 0.534 | ambiguous | 0.6574 | pathogenic | -2.071 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | D | 0.533112106 | disulfide | None | N |
C/H | 0.9867 | likely_pathogenic | 0.9928 | pathogenic | -2.319 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | disulfide | None | N |
C/I | 0.8438 | likely_pathogenic | 0.8633 | pathogenic | -0.741 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | disulfide | None | N |
C/K | 0.9979 | likely_pathogenic | 0.9987 | pathogenic | -1.186 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | disulfide | None | N |
C/L | 0.8199 | likely_pathogenic | 0.8568 | pathogenic | -0.741 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | disulfide | None | N |
C/M | 0.8855 | likely_pathogenic | 0.9099 | pathogenic | 0.103 | Stabilizing | 1.0 | D | 0.867 | deleterious | None | None | disulfide | None | N |
C/N | 0.9747 | likely_pathogenic | 0.9866 | pathogenic | -1.768 | Destabilizing | 1.0 | D | 0.918 | deleterious | None | None | disulfide | None | N |
C/P | 0.9972 | likely_pathogenic | 0.9984 | pathogenic | -1.042 | Destabilizing | 1.0 | D | 0.919 | deleterious | None | None | disulfide | None | N |
C/Q | 0.9917 | likely_pathogenic | 0.9955 | pathogenic | -1.321 | Destabilizing | 1.0 | D | 0.929 | deleterious | None | None | disulfide | None | N |
C/R | 0.9841 | likely_pathogenic | 0.9912 | pathogenic | -1.557 | Destabilizing | 1.0 | D | 0.923 | deleterious | D | 0.559863641 | disulfide | None | N |
C/S | 0.838 | likely_pathogenic | 0.9124 | pathogenic | -2.079 | Highly Destabilizing | 1.0 | D | 0.802 | deleterious | D | 0.536732957 | disulfide | None | N |
C/T | 0.8867 | likely_pathogenic | 0.934 | pathogenic | -1.661 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | disulfide | None | N |
C/V | 0.7218 | likely_pathogenic | 0.7572 | pathogenic | -1.042 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | disulfide | None | N |
C/W | 0.9404 | likely_pathogenic | 0.9573 | pathogenic | -1.513 | Destabilizing | 1.0 | D | 0.892 | deleterious | D | 0.559863641 | disulfide | None | N |
C/Y | 0.8535 | likely_pathogenic | 0.9018 | pathogenic | -1.314 | Destabilizing | 1.0 | D | 0.923 | deleterious | D | 0.548089262 | disulfide | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.