Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6508 | 19747;19748;19749 | chr2:178728302;178728301;178728300 | chr2:179593029;179593028;179593027 |
N2AB | 6191 | 18796;18797;18798 | chr2:178728302;178728301;178728300 | chr2:179593029;179593028;179593027 |
N2A | 5264 | 16015;16016;16017 | chr2:178728302;178728301;178728300 | chr2:179593029;179593028;179593027 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.948 | N | 0.487 | 0.217 | 0.536334086147 | gnomAD-4.0.0 | 1.59281E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02847E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2882 | likely_benign | 0.2139 | benign | -0.515 | Destabilizing | 0.992 | D | 0.449 | neutral | None | None | None | None | I |
L/C | 0.7303 | likely_pathogenic | 0.6372 | pathogenic | -0.776 | Destabilizing | 1.0 | D | 0.399 | neutral | None | None | None | None | I |
L/D | 0.6847 | likely_pathogenic | 0.5232 | ambiguous | -0.139 | Destabilizing | 0.999 | D | 0.551 | neutral | None | None | None | None | I |
L/E | 0.344 | ambiguous | 0.2437 | benign | -0.218 | Destabilizing | 0.999 | D | 0.548 | neutral | None | None | None | None | I |
L/F | 0.1404 | likely_benign | 0.1241 | benign | -0.534 | Destabilizing | 0.998 | D | 0.46 | neutral | N | 0.488744203 | None | None | I |
L/G | 0.5815 | likely_pathogenic | 0.4835 | ambiguous | -0.658 | Destabilizing | 0.999 | D | 0.551 | neutral | None | None | None | None | I |
L/H | 0.2616 | likely_benign | 0.2227 | benign | 0.049 | Stabilizing | 1.0 | D | 0.553 | neutral | N | 0.49836818 | None | None | I |
L/I | 0.1254 | likely_benign | 0.1025 | benign | -0.256 | Destabilizing | 0.733 | D | 0.265 | neutral | D | 0.527997654 | None | None | I |
L/K | 0.3361 | likely_benign | 0.2558 | benign | -0.373 | Destabilizing | 0.999 | D | 0.459 | neutral | None | None | None | None | I |
L/M | 0.1478 | likely_benign | 0.1337 | benign | -0.542 | Destabilizing | 0.999 | D | 0.475 | neutral | None | None | None | None | I |
L/N | 0.412 | ambiguous | 0.329 | benign | -0.244 | Destabilizing | 1.0 | D | 0.557 | neutral | None | None | None | None | I |
L/P | 0.2978 | likely_benign | 0.1826 | benign | -0.312 | Destabilizing | 0.391 | N | 0.392 | neutral | N | 0.350073591 | None | None | I |
L/Q | 0.1738 | likely_benign | 0.1353 | benign | -0.41 | Destabilizing | 1.0 | D | 0.459 | neutral | None | None | None | None | I |
L/R | 0.2544 | likely_benign | 0.2019 | benign | 0.103 | Stabilizing | 0.999 | D | 0.463 | neutral | N | 0.521551684 | None | None | I |
L/S | 0.2371 | likely_benign | 0.1736 | benign | -0.671 | Destabilizing | 0.999 | D | 0.451 | neutral | None | None | None | None | I |
L/T | 0.2887 | likely_benign | 0.2152 | benign | -0.641 | Destabilizing | 0.999 | D | 0.413 | neutral | None | None | None | None | I |
L/V | 0.1274 | likely_benign | 0.1036 | benign | -0.312 | Destabilizing | 0.948 | D | 0.487 | neutral | N | 0.509411893 | None | None | I |
L/W | 0.2985 | likely_benign | 0.2414 | benign | -0.561 | Destabilizing | 1.0 | D | 0.535 | neutral | None | None | None | None | I |
L/Y | 0.3706 | ambiguous | 0.3151 | benign | -0.32 | Destabilizing | 1.0 | D | 0.404 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.