Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC650819747;19748;19749 chr2:178728302;178728301;178728300chr2:179593029;179593028;179593027
N2AB619118796;18797;18798 chr2:178728302;178728301;178728300chr2:179593029;179593028;179593027
N2A526416015;16016;16017 chr2:178728302;178728301;178728300chr2:179593029;179593028;179593027
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Ig-49
  • Domain position: 28
  • Structural Position: 42
  • Q(SASA): 0.7882
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/V None None 0.948 N 0.487 0.217 0.536334086147 gnomAD-4.0.0 1.59281E-06 None None None None I None 0 0 None 0 0 None 0 0 0 0 3.02847E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.2882 likely_benign 0.2139 benign -0.515 Destabilizing 0.992 D 0.449 neutral None None None None I
L/C 0.7303 likely_pathogenic 0.6372 pathogenic -0.776 Destabilizing 1.0 D 0.399 neutral None None None None I
L/D 0.6847 likely_pathogenic 0.5232 ambiguous -0.139 Destabilizing 0.999 D 0.551 neutral None None None None I
L/E 0.344 ambiguous 0.2437 benign -0.218 Destabilizing 0.999 D 0.548 neutral None None None None I
L/F 0.1404 likely_benign 0.1241 benign -0.534 Destabilizing 0.998 D 0.46 neutral N 0.488744203 None None I
L/G 0.5815 likely_pathogenic 0.4835 ambiguous -0.658 Destabilizing 0.999 D 0.551 neutral None None None None I
L/H 0.2616 likely_benign 0.2227 benign 0.049 Stabilizing 1.0 D 0.553 neutral N 0.49836818 None None I
L/I 0.1254 likely_benign 0.1025 benign -0.256 Destabilizing 0.733 D 0.265 neutral D 0.527997654 None None I
L/K 0.3361 likely_benign 0.2558 benign -0.373 Destabilizing 0.999 D 0.459 neutral None None None None I
L/M 0.1478 likely_benign 0.1337 benign -0.542 Destabilizing 0.999 D 0.475 neutral None None None None I
L/N 0.412 ambiguous 0.329 benign -0.244 Destabilizing 1.0 D 0.557 neutral None None None None I
L/P 0.2978 likely_benign 0.1826 benign -0.312 Destabilizing 0.391 N 0.392 neutral N 0.350073591 None None I
L/Q 0.1738 likely_benign 0.1353 benign -0.41 Destabilizing 1.0 D 0.459 neutral None None None None I
L/R 0.2544 likely_benign 0.2019 benign 0.103 Stabilizing 0.999 D 0.463 neutral N 0.521551684 None None I
L/S 0.2371 likely_benign 0.1736 benign -0.671 Destabilizing 0.999 D 0.451 neutral None None None None I
L/T 0.2887 likely_benign 0.2152 benign -0.641 Destabilizing 0.999 D 0.413 neutral None None None None I
L/V 0.1274 likely_benign 0.1036 benign -0.312 Destabilizing 0.948 D 0.487 neutral N 0.509411893 None None I
L/W 0.2985 likely_benign 0.2414 benign -0.561 Destabilizing 1.0 D 0.535 neutral None None None None I
L/Y 0.3706 ambiguous 0.3151 benign -0.32 Destabilizing 1.0 D 0.404 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.