Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6512 | 19759;19760;19761 | chr2:178728290;178728289;178728288 | chr2:179593017;179593016;179593015 |
N2AB | 6195 | 18808;18809;18810 | chr2:178728290;178728289;178728288 | chr2:179593017;179593016;179593015 |
N2A | 5268 | 16027;16028;16029 | chr2:178728290;178728289;178728288 | chr2:179593017;179593016;179593015 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs2079716781 | None | 0.103 | N | 0.419 | 0.173 | 0.208000267992 | gnomAD-4.0.0 | 1.36892E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79935E-06 | 0 | 0 |
A/V | rs200902581 | -0.27 | 0.046 | N | 0.283 | 0.262 | 0.21279746466 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.30822E-04 | None | 0 | 0 | 0 |
A/V | rs200902581 | -0.27 | 0.046 | N | 0.283 | 0.262 | 0.21279746466 | gnomAD-4.0.0 | 6.16005E-06 | None | None | None | None | N | None | 2.98954E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 9.27773E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4824 | ambiguous | 0.5177 | ambiguous | -0.768 | Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | N |
A/D | 0.6953 | likely_pathogenic | 0.7211 | pathogenic | -1.023 | Destabilizing | 0.968 | D | 0.822 | deleterious | N | 0.50920125 | None | None | N |
A/E | 0.549 | ambiguous | 0.5792 | pathogenic | -1.086 | Destabilizing | 0.919 | D | 0.759 | deleterious | None | None | None | None | N |
A/F | 0.3906 | ambiguous | 0.3736 | ambiguous | -0.963 | Destabilizing | 0.988 | D | 0.844 | deleterious | None | None | None | None | N |
A/G | 0.198 | likely_benign | 0.2103 | benign | -0.97 | Destabilizing | 0.811 | D | 0.642 | neutral | N | 0.509027891 | None | None | N |
A/H | 0.6786 | likely_pathogenic | 0.6867 | pathogenic | -1.185 | Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
A/I | 0.2861 | likely_benign | 0.2839 | benign | -0.313 | Destabilizing | 0.851 | D | 0.713 | prob.delet. | None | None | None | None | N |
A/K | 0.7079 | likely_pathogenic | 0.736 | pathogenic | -1.145 | Destabilizing | 0.919 | D | 0.758 | deleterious | None | None | None | None | N |
A/L | 0.2614 | likely_benign | 0.262 | benign | -0.313 | Destabilizing | 0.702 | D | 0.697 | prob.neutral | None | None | None | None | N |
A/M | 0.314 | likely_benign | 0.3145 | benign | -0.259 | Destabilizing | 0.988 | D | 0.726 | prob.delet. | None | None | None | None | N |
A/N | 0.5776 | likely_pathogenic | 0.5912 | pathogenic | -0.758 | Destabilizing | 0.976 | D | 0.843 | deleterious | None | None | None | None | N |
A/P | 0.3884 | ambiguous | 0.3907 | ambiguous | -0.417 | Destabilizing | 0.984 | D | 0.759 | deleterious | N | 0.49044213 | None | None | N |
A/Q | 0.574 | likely_pathogenic | 0.5897 | pathogenic | -0.947 | Destabilizing | 0.988 | D | 0.742 | deleterious | None | None | None | None | N |
A/R | 0.6251 | likely_pathogenic | 0.6468 | pathogenic | -0.765 | Destabilizing | 0.976 | D | 0.745 | deleterious | None | None | None | None | N |
A/S | 0.1176 | likely_benign | 0.1179 | benign | -1.048 | Destabilizing | 0.103 | N | 0.419 | neutral | N | 0.479494418 | None | None | N |
A/T | 0.1065 | likely_benign | 0.1098 | benign | -1.02 | Destabilizing | 0.811 | D | 0.649 | neutral | N | 0.452654533 | None | None | N |
A/V | 0.1362 | likely_benign | 0.1363 | benign | -0.417 | Destabilizing | 0.046 | N | 0.283 | neutral | N | 0.302239572 | None | None | N |
A/W | 0.8097 | likely_pathogenic | 0.8021 | pathogenic | -1.271 | Destabilizing | 0.999 | D | 0.859 | deleterious | None | None | None | None | N |
A/Y | 0.5557 | ambiguous | 0.5516 | ambiguous | -0.885 | Destabilizing | 0.996 | D | 0.845 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.