Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6517 | 19774;19775;19776 | chr2:178728275;178728274;178728273 | chr2:179593002;179593001;179593000 |
N2AB | 6200 | 18823;18824;18825 | chr2:178728275;178728274;178728273 | chr2:179593002;179593001;179593000 |
N2A | 5273 | 16042;16043;16044 | chr2:178728275;178728274;178728273 | chr2:179593002;179593001;179593000 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs904836264 | None | 0.434 | N | 0.373 | 0.333 | 0.18274738541 | gnomAD-4.0.0 | 1.36884E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99653E-07 | 0 | 1.65755E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4226 | ambiguous | 0.474 | ambiguous | -0.405 | Destabilizing | 0.996 | D | 0.641 | neutral | N | 0.499225367 | None | None | N |
D/C | 0.8763 | likely_pathogenic | 0.8836 | pathogenic | -0.078 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
D/E | 0.4268 | ambiguous | 0.4548 | ambiguous | -0.302 | Destabilizing | 0.999 | D | 0.507 | neutral | N | 0.50644808 | None | None | N |
D/F | 0.8666 | likely_pathogenic | 0.8804 | pathogenic | -0.125 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
D/G | 0.2436 | likely_benign | 0.2684 | benign | -0.65 | Destabilizing | 0.434 | N | 0.373 | neutral | N | 0.472545829 | None | None | N |
D/H | 0.6338 | likely_pathogenic | 0.6804 | pathogenic | -0.036 | Destabilizing | 1.0 | D | 0.663 | neutral | N | 0.511088651 | None | None | N |
D/I | 0.8567 | likely_pathogenic | 0.8793 | pathogenic | 0.21 | Stabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
D/K | 0.7766 | likely_pathogenic | 0.811 | pathogenic | 0.191 | Stabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
D/L | 0.7857 | likely_pathogenic | 0.8131 | pathogenic | 0.21 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
D/M | 0.9119 | likely_pathogenic | 0.9275 | pathogenic | 0.385 | Stabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | N |
D/N | 0.1387 | likely_benign | 0.1599 | benign | -0.244 | Destabilizing | 0.999 | D | 0.684 | prob.neutral | N | 0.461344935 | None | None | N |
D/P | 0.9873 | likely_pathogenic | 0.9883 | pathogenic | 0.028 | Stabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
D/Q | 0.7251 | likely_pathogenic | 0.7767 | pathogenic | -0.159 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
D/R | 0.7666 | likely_pathogenic | 0.7923 | pathogenic | 0.403 | Stabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
D/S | 0.3081 | likely_benign | 0.3612 | ambiguous | -0.368 | Destabilizing | 0.997 | D | 0.651 | neutral | None | None | None | None | N |
D/T | 0.746 | likely_pathogenic | 0.7882 | pathogenic | -0.164 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
D/V | 0.6342 | likely_pathogenic | 0.6769 | pathogenic | 0.028 | Stabilizing | 1.0 | D | 0.681 | prob.neutral | D | 0.529446396 | None | None | N |
D/W | 0.9654 | likely_pathogenic | 0.9673 | pathogenic | 0.08 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
D/Y | 0.4099 | ambiguous | 0.4263 | ambiguous | 0.13 | Stabilizing | 1.0 | D | 0.675 | prob.neutral | N | 0.518090091 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.