Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6518 | 19777;19778;19779 | chr2:178728272;178728271;178728270 | chr2:179592999;179592998;179592997 |
N2AB | 6201 | 18826;18827;18828 | chr2:178728272;178728271;178728270 | chr2:179592999;179592998;179592997 |
N2A | 5274 | 16045;16046;16047 | chr2:178728272;178728271;178728270 | chr2:179592999;179592998;179592997 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 0.928 | N | 0.547 | 0.447 | 0.546952355657 | gnomAD-4.0.0 | 1.59247E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86017E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3764 | ambiguous | 0.4167 | ambiguous | -0.333 | Destabilizing | 0.273 | N | 0.384 | neutral | N | 0.503485463 | None | None | N |
G/C | 0.4895 | ambiguous | 0.5244 | ambiguous | -0.927 | Destabilizing | 0.038 | N | 0.445 | neutral | None | None | None | None | N |
G/D | 0.1862 | likely_benign | 0.2465 | benign | -0.426 | Destabilizing | 0.894 | D | 0.482 | neutral | None | None | None | None | N |
G/E | 0.2525 | likely_benign | 0.3044 | benign | -0.562 | Destabilizing | 0.864 | D | 0.547 | neutral | N | 0.492734588 | None | None | N |
G/F | 0.8578 | likely_pathogenic | 0.87 | pathogenic | -0.911 | Destabilizing | 0.894 | D | 0.637 | neutral | None | None | None | None | N |
G/H | 0.5069 | ambiguous | 0.5669 | pathogenic | -0.49 | Destabilizing | 0.995 | D | 0.558 | neutral | None | None | None | None | N |
G/I | 0.7636 | likely_pathogenic | 0.7957 | pathogenic | -0.388 | Destabilizing | 0.593 | D | 0.629 | neutral | None | None | None | None | N |
G/K | 0.4449 | ambiguous | 0.5006 | ambiguous | -0.844 | Destabilizing | 0.894 | D | 0.543 | neutral | None | None | None | None | N |
G/L | 0.7943 | likely_pathogenic | 0.8188 | pathogenic | -0.388 | Destabilizing | 0.809 | D | 0.603 | neutral | None | None | None | None | N |
G/M | 0.7806 | likely_pathogenic | 0.8028 | pathogenic | -0.556 | Destabilizing | 0.985 | D | 0.631 | neutral | None | None | None | None | N |
G/N | 0.2701 | likely_benign | 0.3071 | benign | -0.564 | Destabilizing | 0.894 | D | 0.465 | neutral | None | None | None | None | N |
G/P | 0.9873 | likely_pathogenic | 0.9888 | pathogenic | -0.335 | Destabilizing | 0.945 | D | 0.539 | neutral | None | None | None | None | N |
G/Q | 0.3271 | likely_benign | 0.3825 | ambiguous | -0.79 | Destabilizing | 0.945 | D | 0.545 | neutral | None | None | None | None | N |
G/R | 0.3057 | likely_benign | 0.3528 | ambiguous | -0.419 | Destabilizing | 0.928 | D | 0.547 | neutral | N | 0.509157003 | None | None | N |
G/S | 0.1432 | likely_benign | 0.1564 | benign | -0.754 | Destabilizing | 0.178 | N | 0.304 | neutral | None | None | None | None | N |
G/T | 0.4414 | ambiguous | 0.4945 | ambiguous | -0.808 | Destabilizing | 0.809 | D | 0.493 | neutral | None | None | None | None | N |
G/V | 0.6606 | likely_pathogenic | 0.71 | pathogenic | -0.335 | Destabilizing | 0.013 | N | 0.407 | neutral | D | 0.542353773 | None | None | N |
G/W | 0.6684 | likely_pathogenic | 0.7033 | pathogenic | -1.09 | Destabilizing | 0.995 | D | 0.582 | neutral | None | None | None | None | N |
G/Y | 0.7137 | likely_pathogenic | 0.7339 | pathogenic | -0.736 | Destabilizing | 0.985 | D | 0.633 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.