Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6523 | 19792;19793;19794 | chr2:178728257;178728256;178728255 | chr2:179592984;179592983;179592982 |
N2AB | 6206 | 18841;18842;18843 | chr2:178728257;178728256;178728255 | chr2:179592984;179592983;179592982 |
N2A | 5279 | 16060;16061;16062 | chr2:178728257;178728256;178728255 | chr2:179592984;179592983;179592982 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1560756818 | None | None | N | 0.087 | 0.109 | 0.0986583533028 | gnomAD-4.0.0 | 2.73774E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.63854E-05 | 0 |
T/P | None | None | 0.301 | N | 0.317 | 0.272 | 0.250579442822 | gnomAD-4.0.0 | 6.84435E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99675E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0604 | likely_benign | 0.062 | benign | -0.304 | Destabilizing | None | N | 0.087 | neutral | N | 0.420176756 | None | None | I |
T/C | 0.3189 | likely_benign | 0.3618 | ambiguous | -0.318 | Destabilizing | 0.667 | D | 0.271 | neutral | None | None | None | None | I |
T/D | 0.1663 | likely_benign | 0.1887 | benign | 0.424 | Stabilizing | None | N | 0.138 | neutral | None | None | None | None | I |
T/E | 0.1731 | likely_benign | 0.2029 | benign | 0.347 | Stabilizing | 0.055 | N | 0.277 | neutral | None | None | None | None | I |
T/F | 0.1529 | likely_benign | 0.1753 | benign | -0.908 | Destabilizing | 0.124 | N | 0.44 | neutral | None | None | None | None | I |
T/G | 0.1333 | likely_benign | 0.1472 | benign | -0.398 | Destabilizing | None | N | 0.111 | neutral | None | None | None | None | I |
T/H | 0.156 | likely_benign | 0.1761 | benign | -0.685 | Destabilizing | 0.001 | N | 0.198 | neutral | None | None | None | None | I |
T/I | 0.1392 | likely_benign | 0.1624 | benign | -0.181 | Destabilizing | 0.175 | N | 0.319 | neutral | N | 0.477590263 | None | None | I |
T/K | 0.1444 | likely_benign | 0.1687 | benign | -0.2 | Destabilizing | 0.081 | N | 0.279 | neutral | N | 0.449267512 | None | None | I |
T/L | 0.083 | likely_benign | 0.0896 | benign | -0.181 | Destabilizing | 0.055 | N | 0.306 | neutral | None | None | None | None | I |
T/M | 0.0944 | likely_benign | 0.103 | benign | -0.12 | Destabilizing | 0.667 | D | 0.262 | neutral | None | None | None | None | I |
T/N | 0.0773 | likely_benign | 0.0829 | benign | -0.063 | Destabilizing | 0.055 | N | 0.151 | neutral | None | None | None | None | I |
T/P | 0.0673 | likely_benign | 0.0677 | benign | -0.195 | Destabilizing | 0.301 | N | 0.317 | neutral | N | 0.422504985 | None | None | I |
T/Q | 0.1551 | likely_benign | 0.1767 | benign | -0.234 | Destabilizing | 0.22 | N | 0.373 | neutral | None | None | None | None | I |
T/R | 0.1167 | likely_benign | 0.1346 | benign | -0.017 | Destabilizing | 0.175 | N | 0.317 | neutral | N | 0.465487758 | None | None | I |
T/S | 0.0722 | likely_benign | 0.0772 | benign | -0.273 | Destabilizing | 0.001 | N | 0.075 | neutral | N | 0.373574887 | None | None | I |
T/V | 0.1121 | likely_benign | 0.1257 | benign | -0.195 | Destabilizing | 0.055 | N | 0.153 | neutral | None | None | None | None | I |
T/W | 0.4086 | ambiguous | 0.4566 | ambiguous | -0.949 | Destabilizing | 0.883 | D | 0.323 | neutral | None | None | None | None | I |
T/Y | 0.1645 | likely_benign | 0.184 | benign | -0.631 | Destabilizing | 0.001 | N | 0.207 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.