Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6528 | 19807;19808;19809 | chr2:178728242;178728241;178728240 | chr2:179592969;179592968;179592967 |
N2AB | 6211 | 18856;18857;18858 | chr2:178728242;178728241;178728240 | chr2:179592969;179592968;179592967 |
N2A | 5284 | 16075;16076;16077 | chr2:178728242;178728241;178728240 | chr2:179592969;179592968;179592967 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs779960008 | -0.334 | 0.001 | N | 0.151 | 0.099 | 0.208000267992 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
R/K | rs779960008 | -0.334 | 0.001 | N | 0.151 | 0.099 | 0.208000267992 | gnomAD-4.0.0 | 1.59265E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43345E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2876 | likely_benign | 0.3365 | benign | -0.421 | Destabilizing | 0.25 | N | 0.443 | neutral | None | None | None | None | N |
R/C | 0.145 | likely_benign | 0.1769 | benign | -0.425 | Destabilizing | 0.992 | D | 0.545 | neutral | None | None | None | None | N |
R/D | 0.4503 | ambiguous | 0.527 | ambiguous | 0.013 | Stabilizing | 0.617 | D | 0.514 | neutral | None | None | None | None | N |
R/E | 0.2579 | likely_benign | 0.306 | benign | 0.095 | Stabilizing | 0.25 | N | 0.418 | neutral | None | None | None | None | N |
R/F | 0.3923 | ambiguous | 0.4478 | ambiguous | -0.524 | Destabilizing | 0.972 | D | 0.537 | neutral | None | None | None | None | N |
R/G | 0.1883 | likely_benign | 0.2263 | benign | -0.665 | Destabilizing | 0.549 | D | 0.481 | neutral | N | 0.488392263 | None | None | N |
R/H | 0.0699 | likely_benign | 0.0746 | benign | -1.031 | Destabilizing | 0.92 | D | 0.462 | neutral | None | None | None | None | N |
R/I | 0.1678 | likely_benign | 0.1806 | benign | 0.205 | Stabilizing | 0.896 | D | 0.531 | neutral | N | 0.502968711 | None | None | N |
R/K | 0.0982 | likely_benign | 0.1044 | benign | -0.399 | Destabilizing | 0.001 | N | 0.151 | neutral | N | 0.431604471 | None | None | N |
R/L | 0.1682 | likely_benign | 0.19 | benign | 0.205 | Stabilizing | 0.617 | D | 0.481 | neutral | None | None | None | None | N |
R/M | 0.2095 | likely_benign | 0.2325 | benign | -0.093 | Destabilizing | 0.972 | D | 0.505 | neutral | None | None | None | None | N |
R/N | 0.3359 | likely_benign | 0.3856 | ambiguous | 0.061 | Stabilizing | 0.617 | D | 0.439 | neutral | None | None | None | None | N |
R/P | 0.7495 | likely_pathogenic | 0.7906 | pathogenic | 0.017 | Stabilizing | 0.92 | D | 0.503 | neutral | None | None | None | None | N |
R/Q | 0.0811 | likely_benign | 0.0874 | benign | -0.149 | Destabilizing | 0.447 | N | 0.472 | neutral | None | None | None | None | N |
R/S | 0.2593 | likely_benign | 0.3074 | benign | -0.567 | Destabilizing | 0.379 | N | 0.455 | neutral | N | 0.496752027 | None | None | N |
R/T | 0.1437 | likely_benign | 0.1567 | benign | -0.329 | Destabilizing | 0.549 | D | 0.481 | neutral | N | 0.47597411 | None | None | N |
R/V | 0.2364 | likely_benign | 0.2682 | benign | 0.017 | Stabilizing | 0.85 | D | 0.497 | neutral | None | None | None | None | N |
R/W | 0.1491 | likely_benign | 0.1634 | benign | -0.351 | Destabilizing | 0.992 | D | 0.591 | neutral | None | None | None | None | N |
R/Y | 0.2732 | likely_benign | 0.3247 | benign | 0.01 | Stabilizing | 0.972 | D | 0.543 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.