Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6535 | 19828;19829;19830 | chr2:178728221;178728220;178728219 | chr2:179592948;179592947;179592946 |
N2AB | 6218 | 18877;18878;18879 | chr2:178728221;178728220;178728219 | chr2:179592948;179592947;179592946 |
N2A | 5291 | 16096;16097;16098 | chr2:178728221;178728220;178728219 | chr2:179592948;179592947;179592946 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | None | N | 0.133 | 0.106 | 0.101711395817 | gnomAD-4.0.0 | 6.84502E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99735E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0822 | likely_benign | 0.0785 | benign | -0.492 | Destabilizing | 0.005 | N | 0.219 | neutral | N | 0.50481415 | None | None | N |
S/C | 0.1409 | likely_benign | 0.1569 | benign | -0.55 | Destabilizing | 0.295 | N | 0.577 | neutral | N | 0.490127009 | None | None | N |
S/D | 0.2564 | likely_benign | 0.2357 | benign | -0.991 | Destabilizing | 0.072 | N | 0.421 | neutral | None | None | None | None | N |
S/E | 0.3562 | ambiguous | 0.3262 | benign | -0.98 | Destabilizing | 0.072 | N | 0.411 | neutral | None | None | None | None | N |
S/F | 0.1563 | likely_benign | 0.1473 | benign | -0.619 | Destabilizing | 0.171 | N | 0.628 | neutral | N | 0.515089859 | None | None | N |
S/G | 0.1149 | likely_benign | 0.1114 | benign | -0.753 | Destabilizing | 0.031 | N | 0.437 | neutral | None | None | None | None | N |
S/H | 0.2575 | likely_benign | 0.2449 | benign | -1.367 | Destabilizing | 0.628 | D | 0.576 | neutral | None | None | None | None | N |
S/I | 0.1176 | likely_benign | 0.1143 | benign | 0.095 | Stabilizing | 0.038 | N | 0.601 | neutral | None | None | None | None | N |
S/K | 0.4623 | ambiguous | 0.4272 | ambiguous | -0.926 | Destabilizing | 0.072 | N | 0.411 | neutral | None | None | None | None | N |
S/L | 0.0959 | likely_benign | 0.0949 | benign | 0.095 | Stabilizing | None | N | 0.276 | neutral | None | None | None | None | N |
S/M | 0.1271 | likely_benign | 0.13 | benign | 0.347 | Stabilizing | 0.214 | N | 0.585 | neutral | None | None | None | None | N |
S/N | 0.0933 | likely_benign | 0.0896 | benign | -1.004 | Destabilizing | 0.072 | N | 0.429 | neutral | None | None | None | None | N |
S/P | 0.5834 | likely_pathogenic | 0.5323 | ambiguous | -0.066 | Destabilizing | 0.106 | N | 0.573 | neutral | N | 0.501394409 | None | None | N |
S/Q | 0.4025 | ambiguous | 0.3753 | ambiguous | -1.148 | Destabilizing | 0.356 | N | 0.512 | neutral | None | None | None | None | N |
S/R | 0.376 | ambiguous | 0.3386 | benign | -0.834 | Destabilizing | 0.072 | N | 0.579 | neutral | None | None | None | None | N |
S/T | 0.0536 | likely_benign | 0.0547 | benign | -0.861 | Destabilizing | None | N | 0.133 | neutral | N | 0.417387167 | None | None | N |
S/V | 0.1334 | likely_benign | 0.1307 | benign | -0.066 | Destabilizing | 0.016 | N | 0.523 | neutral | None | None | None | None | N |
S/W | 0.2515 | likely_benign | 0.2285 | benign | -0.702 | Destabilizing | 0.864 | D | 0.644 | neutral | None | None | None | None | N |
S/Y | 0.1428 | likely_benign | 0.1392 | benign | -0.403 | Destabilizing | 0.295 | N | 0.619 | neutral | N | 0.514743142 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.