Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6539 | 19840;19841;19842 | chr2:178728209;178728208;178728207 | chr2:179592936;179592935;179592934 |
N2AB | 6222 | 18889;18890;18891 | chr2:178728209;178728208;178728207 | chr2:179592936;179592935;179592934 |
N2A | 5295 | 16108;16109;16110 | chr2:178728209;178728208;178728207 | chr2:179592936;179592935;179592934 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | None | N | 0.308 | 0.077 | 0.0716867268079 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1548 | likely_benign | 0.1729 | benign | -0.939 | Destabilizing | 0.124 | N | 0.563 | neutral | D | 0.52376527 | None | None | N |
E/C | 0.8314 | likely_pathogenic | 0.8871 | pathogenic | -0.686 | Destabilizing | 0.968 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/D | 0.158 | likely_benign | 0.1831 | benign | -1.503 | Destabilizing | None | N | 0.308 | neutral | N | 0.4968881 | None | None | N |
E/F | 0.6379 | likely_pathogenic | 0.7132 | pathogenic | -0.786 | Destabilizing | 0.726 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/G | 0.2821 | likely_benign | 0.3207 | benign | -1.324 | Destabilizing | 0.22 | N | 0.607 | neutral | N | 0.495696417 | None | None | N |
E/H | 0.366 | ambiguous | 0.4599 | ambiguous | -1.14 | Destabilizing | 0.909 | D | 0.618 | neutral | None | None | None | None | N |
E/I | 0.2615 | likely_benign | 0.315 | benign | 0.119 | Stabilizing | 0.567 | D | 0.734 | prob.delet. | None | None | None | None | N |
E/K | 0.1869 | likely_benign | 0.2386 | benign | -1.058 | Destabilizing | 0.22 | N | 0.569 | neutral | N | 0.463698246 | None | None | N |
E/L | 0.3151 | likely_benign | 0.3717 | ambiguous | 0.119 | Stabilizing | 0.396 | N | 0.691 | prob.neutral | None | None | None | None | N |
E/M | 0.3721 | ambiguous | 0.4237 | ambiguous | 0.678 | Stabilizing | 0.968 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/N | 0.2957 | likely_benign | 0.3628 | ambiguous | -1.383 | Destabilizing | 0.157 | N | 0.575 | neutral | None | None | None | None | N |
E/P | 0.9439 | likely_pathogenic | 0.9633 | pathogenic | -0.213 | Destabilizing | 0.726 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/Q | 0.1343 | likely_benign | 0.1593 | benign | -1.192 | Destabilizing | 0.497 | N | 0.624 | neutral | N | 0.493039718 | None | None | N |
E/R | 0.2671 | likely_benign | 0.3348 | benign | -0.961 | Destabilizing | 0.567 | D | 0.615 | neutral | None | None | None | None | N |
E/S | 0.2276 | likely_benign | 0.2682 | benign | -1.848 | Destabilizing | 0.157 | N | 0.571 | neutral | None | None | None | None | N |
E/T | 0.2028 | likely_benign | 0.2296 | benign | -1.511 | Destabilizing | 0.011 | N | 0.408 | neutral | None | None | None | None | N |
E/V | 0.1567 | likely_benign | 0.1843 | benign | -0.213 | Destabilizing | 0.331 | N | 0.664 | neutral | N | 0.477627549 | None | None | N |
E/W | 0.8315 | likely_pathogenic | 0.8795 | pathogenic | -0.794 | Destabilizing | 0.968 | D | 0.673 | neutral | None | None | None | None | N |
E/Y | 0.5243 | ambiguous | 0.6368 | pathogenic | -0.589 | Destabilizing | 0.89 | D | 0.716 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.