Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6540 | 19843;19844;19845 | chr2:178728206;178728205;178728204 | chr2:179592933;179592932;179592931 |
N2AB | 6223 | 18892;18893;18894 | chr2:178728206;178728205;178728204 | chr2:179592933;179592932;179592931 |
N2A | 5296 | 16111;16112;16113 | chr2:178728206;178728205;178728204 | chr2:179592933;179592932;179592931 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1045155829 | None | None | N | 0.333 | 0.366 | 0.492475246742 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.50964E-04 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs1157784163 | -0.48 | None | N | 0.273 | 0.133 | 0.165133752707 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
V/I | rs1157784163 | -0.48 | None | N | 0.273 | 0.133 | 0.165133752707 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/I | rs1157784163 | -0.48 | None | N | 0.273 | 0.133 | 0.165133752707 | gnomAD-4.0.0 | 1.24006E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69581E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.526 | ambiguous | 0.5708 | pathogenic | -2.317 | Highly Destabilizing | None | N | 0.333 | neutral | N | 0.501016016 | None | None | N |
V/C | 0.901 | likely_pathogenic | 0.8955 | pathogenic | -2.149 | Highly Destabilizing | 0.628 | D | 0.763 | deleterious | None | None | None | None | N |
V/D | 0.8955 | likely_pathogenic | 0.9041 | pathogenic | -3.427 | Highly Destabilizing | 0.295 | N | 0.799 | deleterious | D | 0.524489095 | None | None | N |
V/E | 0.8355 | likely_pathogenic | 0.8365 | pathogenic | -3.134 | Highly Destabilizing | 0.072 | N | 0.77 | deleterious | None | None | None | None | N |
V/F | 0.3001 | likely_benign | 0.2895 | benign | -1.243 | Destabilizing | 0.055 | N | 0.713 | prob.delet. | N | 0.513647064 | None | None | N |
V/G | 0.5895 | likely_pathogenic | 0.6137 | pathogenic | -2.914 | Highly Destabilizing | 0.029 | N | 0.725 | prob.delet. | D | 0.524489095 | None | None | N |
V/H | 0.9444 | likely_pathogenic | 0.9357 | pathogenic | -2.813 | Highly Destabilizing | 0.864 | D | 0.836 | deleterious | None | None | None | None | N |
V/I | 0.0837 | likely_benign | 0.0859 | benign | -0.595 | Destabilizing | None | N | 0.273 | neutral | N | 0.372059443 | None | None | N |
V/K | 0.8761 | likely_pathogenic | 0.8525 | pathogenic | -1.927 | Destabilizing | 0.072 | N | 0.74 | deleterious | None | None | None | None | N |
V/L | 0.2739 | likely_benign | 0.2891 | benign | -0.595 | Destabilizing | None | N | 0.279 | neutral | N | 0.418117885 | None | None | N |
V/M | 0.2276 | likely_benign | 0.2373 | benign | -0.983 | Destabilizing | 0.007 | N | 0.383 | neutral | None | None | None | None | N |
V/N | 0.8342 | likely_pathogenic | 0.8461 | pathogenic | -2.547 | Highly Destabilizing | 0.356 | N | 0.829 | deleterious | None | None | None | None | N |
V/P | 0.9713 | likely_pathogenic | 0.9752 | pathogenic | -1.148 | Destabilizing | 0.356 | N | 0.789 | deleterious | None | None | None | None | N |
V/Q | 0.8751 | likely_pathogenic | 0.8574 | pathogenic | -2.234 | Highly Destabilizing | 0.356 | N | 0.814 | deleterious | None | None | None | None | N |
V/R | 0.8607 | likely_pathogenic | 0.8337 | pathogenic | -1.939 | Destabilizing | 0.356 | N | 0.814 | deleterious | None | None | None | None | N |
V/S | 0.7668 | likely_pathogenic | 0.7903 | pathogenic | -3.09 | Highly Destabilizing | 0.038 | N | 0.702 | prob.neutral | None | None | None | None | N |
V/T | 0.6776 | likely_pathogenic | 0.7016 | pathogenic | -2.642 | Highly Destabilizing | 0.072 | N | 0.549 | neutral | None | None | None | None | N |
V/W | 0.9221 | likely_pathogenic | 0.9109 | pathogenic | -1.888 | Destabilizing | 0.864 | D | 0.831 | deleterious | None | None | None | None | N |
V/Y | 0.7882 | likely_pathogenic | 0.7657 | pathogenic | -1.558 | Destabilizing | 0.356 | N | 0.743 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.