Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6541 | 19846;19847;19848 | chr2:178728203;178728202;178728201 | chr2:179592930;179592929;179592928 |
N2AB | 6224 | 18895;18896;18897 | chr2:178728203;178728202;178728201 | chr2:179592930;179592929;179592928 |
N2A | 5297 | 16114;16115;16116 | chr2:178728203;178728202;178728201 | chr2:179592930;179592929;179592928 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs1448829330 | None | 0.007 | N | 0.217 | 0.101 | 0.0884992946249 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/D | rs1448829330 | None | 0.007 | N | 0.217 | 0.101 | 0.0884992946249 | gnomAD-4.0.0 | 6.57376E-06 | None | None | None | None | N | None | 2.41348E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1266 | likely_benign | 0.1524 | benign | -0.753 | Destabilizing | None | N | 0.143 | neutral | None | None | None | None | N |
N/C | 0.1803 | likely_benign | 0.2186 | benign | -0.048 | Destabilizing | 0.245 | N | 0.385 | neutral | None | None | None | None | N |
N/D | 0.1023 | likely_benign | 0.1107 | benign | -1.088 | Destabilizing | 0.007 | N | 0.217 | neutral | N | 0.491210135 | None | None | N |
N/E | 0.2111 | likely_benign | 0.2326 | benign | -0.996 | Destabilizing | None | N | 0.074 | neutral | None | None | None | None | N |
N/F | 0.3123 | likely_benign | 0.3417 | ambiguous | -0.672 | Destabilizing | 0.022 | N | 0.494 | neutral | None | None | None | None | N |
N/G | 0.1719 | likely_benign | 0.2113 | benign | -1.079 | Destabilizing | 0.004 | N | 0.165 | neutral | None | None | None | None | N |
N/H | 0.085 | likely_benign | 0.0885 | benign | -0.948 | Destabilizing | 0.108 | N | 0.266 | neutral | N | 0.511990839 | None | None | N |
N/I | 0.1268 | likely_benign | 0.1365 | benign | 0.065 | Stabilizing | 0.007 | N | 0.376 | neutral | N | 0.483997716 | None | None | N |
N/K | 0.1599 | likely_benign | 0.1786 | benign | -0.227 | Destabilizing | 0.003 | N | 0.177 | neutral | N | 0.496442596 | None | None | N |
N/L | 0.1478 | likely_benign | 0.1575 | benign | 0.065 | Stabilizing | None | N | 0.203 | neutral | None | None | None | None | N |
N/M | 0.2147 | likely_benign | 0.2319 | benign | 0.615 | Stabilizing | 0.074 | N | 0.399 | neutral | None | None | None | None | N |
N/P | 0.4008 | ambiguous | 0.4749 | ambiguous | -0.178 | Destabilizing | 0.044 | N | 0.463 | neutral | None | None | None | None | N |
N/Q | 0.1872 | likely_benign | 0.2075 | benign | -1.004 | Destabilizing | 0.044 | N | 0.182 | neutral | None | None | None | None | N |
N/R | 0.1642 | likely_benign | 0.1823 | benign | -0.214 | Destabilizing | None | N | 0.084 | neutral | None | None | None | None | N |
N/S | 0.0638 | likely_benign | 0.0718 | benign | -0.877 | Destabilizing | None | N | 0.078 | neutral | N | 0.43495142 | None | None | N |
N/T | 0.0875 | likely_benign | 0.0979 | benign | -0.604 | Destabilizing | 0.003 | N | 0.177 | neutral | N | 0.488863263 | None | None | N |
N/V | 0.1407 | likely_benign | 0.1551 | benign | -0.178 | Destabilizing | None | N | 0.209 | neutral | None | None | None | None | N |
N/W | 0.5075 | ambiguous | 0.5334 | ambiguous | -0.487 | Destabilizing | 0.55 | D | 0.373 | neutral | None | None | None | None | N |
N/Y | 0.1061 | likely_benign | 0.1098 | benign | -0.218 | Destabilizing | None | N | 0.222 | neutral | D | 0.531480676 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.