Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6548 | 19867;19868;19869 | chr2:178728182;178728181;178728180 | chr2:179592909;179592908;179592907 |
N2AB | 6231 | 18916;18917;18918 | chr2:178728182;178728181;178728180 | chr2:179592909;179592908;179592907 |
N2A | 5304 | 16135;16136;16137 | chr2:178728182;178728181;178728180 | chr2:179592909;179592908;179592907 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.007 | N | 0.267 | 0.198 | 0.453307948783 | gnomAD-4.0.0 | 6.84919E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00114E-07 | 0 | 0 |
T/S | rs369899924 | -0.895 | 0.028 | N | 0.14 | 0.078 | 0.173771789658 | gnomAD-2.1.1 | 8.1E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
T/S | rs369899924 | -0.895 | 0.028 | N | 0.14 | 0.078 | 0.173771789658 | gnomAD-4.0.0 | 2.05476E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.70034E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0865 | likely_benign | 0.0828 | benign | -0.932 | Destabilizing | 0.012 | N | 0.093 | neutral | N | 0.417616453 | None | None | N |
T/C | 0.5656 | likely_pathogenic | 0.5383 | ambiguous | -0.627 | Destabilizing | 0.996 | D | 0.528 | neutral | None | None | None | None | N |
T/D | 0.505 | ambiguous | 0.4835 | ambiguous | -0.417 | Destabilizing | 0.59 | D | 0.528 | neutral | None | None | None | None | N |
T/E | 0.3781 | ambiguous | 0.3863 | ambiguous | -0.392 | Destabilizing | 0.742 | D | 0.539 | neutral | None | None | None | None | N |
T/F | 0.4538 | ambiguous | 0.4591 | ambiguous | -0.929 | Destabilizing | 0.91 | D | 0.585 | neutral | None | None | None | None | N |
T/G | 0.2863 | likely_benign | 0.2881 | benign | -1.216 | Destabilizing | 0.373 | N | 0.502 | neutral | None | None | None | None | N |
T/H | 0.3946 | ambiguous | 0.3847 | ambiguous | -1.453 | Destabilizing | 0.953 | D | 0.556 | neutral | None | None | None | None | N |
T/I | 0.3386 | likely_benign | 0.3753 | ambiguous | -0.256 | Destabilizing | 0.007 | N | 0.267 | neutral | N | 0.489682482 | None | None | N |
T/K | 0.2592 | likely_benign | 0.2544 | benign | -0.774 | Destabilizing | 0.742 | D | 0.529 | neutral | None | None | None | None | N |
T/L | 0.2 | likely_benign | 0.2065 | benign | -0.256 | Destabilizing | 0.17 | N | 0.5 | neutral | None | None | None | None | N |
T/M | 0.1135 | likely_benign | 0.126 | benign | 0.045 | Stabilizing | 0.91 | D | 0.543 | neutral | None | None | None | None | N |
T/N | 0.1596 | likely_benign | 0.1578 | benign | -0.818 | Destabilizing | 0.007 | N | 0.269 | neutral | N | 0.50733438 | None | None | N |
T/P | 0.4999 | ambiguous | 0.4355 | ambiguous | -0.449 | Destabilizing | 0.939 | D | 0.574 | neutral | N | 0.501203372 | None | None | N |
T/Q | 0.2862 | likely_benign | 0.3 | benign | -0.967 | Destabilizing | 0.953 | D | 0.577 | neutral | None | None | None | None | N |
T/R | 0.1831 | likely_benign | 0.1766 | benign | -0.556 | Destabilizing | 0.91 | D | 0.575 | neutral | None | None | None | None | N |
T/S | 0.1198 | likely_benign | 0.1233 | benign | -1.121 | Destabilizing | 0.028 | N | 0.14 | neutral | N | 0.417461738 | None | None | N |
T/V | 0.2393 | likely_benign | 0.2607 | benign | -0.449 | Destabilizing | 0.17 | N | 0.489 | neutral | None | None | None | None | N |
T/W | 0.8189 | likely_pathogenic | 0.8185 | pathogenic | -0.851 | Destabilizing | 0.996 | D | 0.589 | neutral | None | None | None | None | N |
T/Y | 0.4997 | ambiguous | 0.47 | ambiguous | -0.613 | Destabilizing | 0.953 | D | 0.583 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.